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Protein

Uncharacterized protein C16orf96 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C16orf96 homologCurated
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 16

Organism-specific databases

MGIiMGI:1926059 4930562C15Rik

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004135391 – 1145Uncharacterized protein C16orf96 homologAdd BLAST1145

Proteomic databases

MaxQBiE9QMW4
PaxDbiE9QMW4
PRIDEiE9QMW4

PTM databases

iPTMnetiE9QMW4
PhosphoSitePlusiE9QMW4

Expressioni

Gene expression databases

BgeeiENSMUSG00000022518 Expressed in 37 organ(s), highest expression level in testis
ExpressionAtlasiE9QMW4 baseline and differential
GenevisibleiE9QMW4 MM

Structurei

3D structure databases

SMRiE9QMW4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili74 – 101Sequence analysisAdd BLAST28
Coiled coili186 – 212Sequence analysisAdd BLAST27
Coiled coili744 – 816Sequence analysisAdd BLAST73

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi360 – 442Pro-richAdd BLAST83
Compositional biasi582 – 636Ala-richAdd BLAST55

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IJ37 Eukaryota
ENOG4112C1S LUCA
GeneTreeiENSGT00910000144214
HOGENOMiHOG000202728
HOVERGENiHBG108740
InParanoidiE9QMW4
OrthoDBiEOG091G01GZ
TreeFamiTF339506

Family and domain databases

InterProiView protein in InterPro
IPR032013 DUF4795
PfamiView protein in Pfam
PF16043 DUF4795, 1 hit

Sequences (2+)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: E9QMW4-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSFSITFTEL VNVAIPQCGV VNFKALHLLL QGILEHIQIT ELKKVLSGEE
60 70 80 90 100
DFLQSSPAVF IPREGDAQPV INPMKRLSNI FDQVVDRIEK IESKLAEMQD
110 120 130 140 150
IPTTSQLVEE SYGDKRPAEE MWNNIKIQKR IEGNEKATEK FTRTLQDLLN
160 170 180 190 200
DLHVLKGSVE TVQKDVDTIK FIFEKVNPQK LELLGDDLKT QSRKLGALQR
210 220 230 240 250
EVVTLQNKVR AVPQPEEMVL WSGLHEAMFS PEQQKLEVEP SGVWQSMVSL
260 270 280 290 300
PGSPLEQPED AGYIHIPIHS ATPVPTMVQL GTTGALREEE LTRAVELADS
310 320 330 340 350
QRPELAQAFV SQTQRLERAQ ASVSQTQRLE RAQASVSQTQ RLERAQASVS
360 370 380 390 400
QTQNLRQTAP FPFPVPGFVP GPDFMPVYGP RPGMATPSAW ALPRGLARGN
410 420 430 440 450
YWPIWGIGPY QPGQGPLQPM GPMPRVPFPA MGSDIPWTQP LPQGTQWYPN
460 470 480 490 500
IEERGPEYEE QYPEGYQEEM PMDEAPQEEM AVYGALEEEI PTEGAPQDGI
510 520 530 540 550
PKGRARERIS KEKVPKYRTP KERVSYHKAS KDVSPEDTGT KDEAPEVKVL
560 570 580 590 600
KKVVYKDRPQ KDKAPEPRRK GPSSAIKKLR SAIASAAAAA AAYAAHANSA
610 620 630 640 650
AQLAKDAVKA IQDVPANQLA AKAALIASSG PLGAFADFLG AGFGHGATSN
660 670 680 690 700
TPFDEGELEE FPEEFAAPFN PFTSKPVLSQ AMISATQATS PEEKKKAVQY
710 720 730 740 750
SMGHIAQMPS RHNSLKEEFT NLSTTLNQRL NYLANMGSSG VLGSTVNVLE
760 770 780 790 800
EKIINLQKAR LQEEELERVW GHQIDTMKSH YMVLDRAVER LQIRMDDLKI
810 820 830 840 850
LKAEIERLDL VKADKNVMDL ELNEKANRDA LASKANRVDL ETVAMELNEM
860 870 880 890 900
IHSMLLKITN YESDWKKALK HLRKDLNTKL VQSDLNSLKK DIEEVWKVVR
910 920 930 940 950
KLLLEGLRFD PDSAAGFKKK LFERVKCISC DRPVEMMTGP QLITIRNTHG
960 970 980 990 1000
LSRIRPASAN SYEYLQRQLI REQQQHLHFQ NFGVHEEGQG FQKDWGDGPR
1010 1020 1030 1040 1050
NENTLKHKSH DLSTLYPYGD PELMNYDTAE VDILGVDGVL YKGRMSSQFG
1060 1070 1080 1090 1100
TRTGEKDIAA VKVSYYTIPN LTDRVRPGSL LAPGYPPLSP RTSITSATTL
1110 1120 1130 1140
HSATNTTTAR PPSLPPVPQL PPLIPVSRDT QEAPGSAKRL KSPRL
Length:1,145
Mass (Da):127,660
Last modified:April 5, 2011 - v1
Checksum:i3422DB0A6B3B210B
GO
Isoform 2 (identifier: E9QMW4-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     800-1145: ILKAEIERLD...SAKRLKSPRL → VRRSEDQEGG...IKNKSQGLER

Note: No experimental confirmation available.
Show »
Length:852
Mass (Da):94,439
Checksum:i311B277759D199C3
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A6H692A6H692_MOUSE
4930562C15Rik protein
4930562C15Rik
306Annotation score:
M0QWH1M0QWH1_MOUSE
RIKEN cDNA 4930562C15 gene
4930562C15Rik
125Annotation score:
H3BJT7H3BJT7_MOUSE
RIKEN cDNA 4930562C15 gene
4930562C15Rik
43Annotation score:

Sequence cautioni

The sequence BAE21617 differs from that shown. Reason: Frameshift at position 245.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_042127800 – 1145ILKAE…KSPRL → VRRSEDQEGGTGELLLGTTR PSSKGLQNTGELDNILFCIN YTSIKNKSQGLER in isoform 2. CuratedAdd BLAST346

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC167018 Genomic DNA No translation available.
AK133365 mRNA Translation: BAE21617.1 Frameshift.
RefSeqiNP_084468.1, NM_030192.1 [E9QMW4-1]
UniGeneiMm.325551

Genome annotation databases

EnsembliENSMUST00000100211; ENSMUSP00000097784; ENSMUSG00000022518 [E9QMW4-1]
GeneIDi78809
KEGGimmu:78809
UCSCiuc007yam.1 mouse [E9QMW4-2]
uc012aav.1 mouse [E9QMW4-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC167018 Genomic DNA No translation available.
AK133365 mRNA Translation: BAE21617.1 Frameshift.
RefSeqiNP_084468.1, NM_030192.1 [E9QMW4-1]
UniGeneiMm.325551

3D structure databases

SMRiE9QMW4
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiE9QMW4
PhosphoSitePlusiE9QMW4

Proteomic databases

MaxQBiE9QMW4
PaxDbiE9QMW4
PRIDEiE9QMW4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000100211; ENSMUSP00000097784; ENSMUSG00000022518 [E9QMW4-1]
GeneIDi78809
KEGGimmu:78809
UCSCiuc007yam.1 mouse [E9QMW4-2]
uc012aav.1 mouse [E9QMW4-1]

Organism-specific databases

MGIiMGI:1926059 4930562C15Rik

Phylogenomic databases

eggNOGiENOG410IJ37 Eukaryota
ENOG4112C1S LUCA
GeneTreeiENSGT00910000144214
HOGENOMiHOG000202728
HOVERGENiHBG108740
InParanoidiE9QMW4
OrthoDBiEOG091G01GZ
TreeFamiTF339506

Miscellaneous databases

PROiPR:E9QMW4

Gene expression databases

BgeeiENSMUSG00000022518 Expressed in 37 organ(s), highest expression level in testis
ExpressionAtlasiE9QMW4 baseline and differential
GenevisibleiE9QMW4 MM

Family and domain databases

InterProiView protein in InterPro
IPR032013 DUF4795
PfamiView protein in Pfam
PF16043 DUF4795, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCP096_MOUSE
AccessioniPrimary (citable) accession number: E9QMW4
Secondary accession number(s): Q3V087
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 19, 2011
Last sequence update: April 5, 2011
Last modified: September 12, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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