UniProtKB - E9QIZ2 (E9QIZ2_DANRE)
Protein
Submitted name:
Actin-binding LIM protein 1b
Gene
ablim1b
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- actin filament binding Source: GO_Central
GO - Biological processi
- cilium assembly Source: GO_Central
- lamellipodium assembly Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Actin-binding LIM protein 1bImported |
Gene namesi | Name:ablim1bImported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-050327-91, ablim1b |
Subcellular locationi
Cytoskeleton
- actin cytoskeleton Source: GO_Central
- stress fiber Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSDARG00000045064, Expressed in retina and 31 other tissues |
ExpressionAtlasi | E9QIZ2, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 33 – 194 | AbLIM_anchorInterPro annotationAdd BLAST | 162 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 27 – 53 | DisorderedSequence analysisAdd BLAST | 27 | |
Regioni | 94 – 152 | DisorderedSequence analysisAdd BLAST | 59 | |
Regioni | 180 – 201 | DisorderedSequence analysisAdd BLAST | 22 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 35 – 49 | PolarSequence analysisAdd BLAST | 15 | |
Compositional biasi | 119 – 146 | PolarSequence analysisAdd BLAST | 28 |
Phylogenomic databases
GeneTreei | ENSGT00950000182850 |
HOGENOMi | CLU_085917_0_0_1 |
Family and domain databases
InterProi | View protein in InterPro IPR028448, ABLIM1 IPR032402, AbLIM_anchor |
PANTHERi | PTHR24213:SF18, PTHR24213:SF18, 1 hit |
Pfami | View protein in Pfam PF16182, AbLIM_anchor, 1 hit |
(1+)i Sequence
Sequence statusi: Fragment.
This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All
E9QIZ2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MFTEGEEMYL QGSTVWHPDC KNNSRVEEKY RPTRSSSESI CSRPGSSIPG
60 70 80 90 100
SPGHTIYAKV DNEIIDYKDL AAIPRVKAIY DIERPDMISY ESLHSTSSTL
110 120 130 140 150
ERQGRHSPGE PVRASGGSPT RGRATTLPQD PSSLSAETSP RTLSPTPSAE
160 170 180 190 200
GCYDMRERII QRSTSQGSIG SPVYHRHNYI PPLSKSPQHF HRPDQGINMY
R
Computationally mapped potential isoform sequencesi
There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketU3JB13 | U3JB13_DANRE | Actin-binding LIM protein 1b | ablim1b | 758 | Annotation score: | ||
A0A2R8QJ18 | A0A2R8QJ18_DANRE | Actin-binding LIM protein 1b | ablim1b | 292 | Annotation score: | ||
A0A2R8RQ55 | A0A2R8RQ55_DANRE | Actin-binding LIM protein 1b | ablim1b | 333 | Annotation score: | ||
Q58EF7 | Q58EF7_DANRE | Actin-binding LIM protein 1b | ablim1b zgc:112954 | 354 | Annotation score: | ||
F1REG0 | F1REG0_DANRE | Actin-binding LIM protein 1b | ablim1b | 110 | Annotation score: | ||
A0A2R8QQ60 | A0A2R8QQ60_DANRE | Actin-binding LIM protein 1b | ablim1b | 351 | Annotation score: | ||
U3JA64 | U3JA64_DANRE | Actin-binding LIM protein 1b | ablim1b | 33 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 201 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX465198 Genomic DNA No translation available. CU464184 Genomic DNA No translation available. CU915376 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000142756; ENSDARP00000118444; ENSDARG00000045064 |
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX465198 Genomic DNA No translation available. CU464184 Genomic DNA No translation available. CU915376 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSDART00000142756; ENSDARP00000118444; ENSDARG00000045064 |
Organism-specific databases
ZFINi | ZDB-GENE-050327-91, ablim1b |
Phylogenomic databases
GeneTreei | ENSGT00950000182850 |
HOGENOMi | CLU_085917_0_0_1 |
Gene expression databases
Bgeei | ENSDARG00000045064, Expressed in retina and 31 other tissues |
ExpressionAtlasi | E9QIZ2, baseline and differential |
Family and domain databases
InterProi | View protein in InterPro IPR028448, ABLIM1 IPR032402, AbLIM_anchor |
PANTHERi | PTHR24213:SF18, PTHR24213:SF18, 1 hit |
Pfami | View protein in Pfam PF16182, AbLIM_anchor, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | E9QIZ2_DANRE | |
Accessioni | E9QIZ2Primary (citable) accession number: E9QIZ2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 5, 2011 |
Last sequence update: | April 5, 2011 | |
Last modified: | February 10, 2021 | |
This is version 50 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |