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Entry version 55 (16 Jan 2019)
Sequence version 1 (05 Apr 2011)
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Protein

Cation channel sperm-associated protein subunit delta

Gene

Catsperd

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Auxiliary component of the CatSper complex, a complex involved in sperm cell hyperactivation. Sperm cell hyperactivation is needed for sperm motility which is essential late in the preparation of sperm for fertilization. Required for CATSPER1 stability before intraflagellar transport and/or incorporation of the CatSper complex channel into the flagellar membrane.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • flagellated sperm motility Source: UniProtKB
  • multicellular organism development Source: UniProtKB-KW
  • spermatogenesis Source: UniProtKB
  • sperm capacitation Source: UniProtKB

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDevelopmental protein
Biological processDifferentiation, Spermatogenesis

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-MMU-1300642 Sperm Motility And Taxes

Protein family/group databases

Transport Classification Database

More...
TCDBi
1.A.1.19.3 the voltage-gated ion channel (vic) superfamily

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Cation channel sperm-associated protein subunit delta
Short name:
CatSper-delta
Short name:
CatSperdelta
Alternative name(s):
Transmembrane protein 146
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Catsperd
Synonyms:Tmem146
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 17

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2147030 Catsperd

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini17 – 754ExtracellularSequence analysisAdd BLAST738
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei755 – 775HelicalSequence analysisAdd BLAST21
Topological domaini776 – 805CytoplasmicSequence analysisAdd BLAST30

Keywords - Cellular componenti

Cell membrane, Cell projection, Cilium, Flagellum, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Mice are normal but males are sterile. Male sterility is due to defects in sperm cell hyperactivation and decreased stability of Catsper1.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 16Sequence analysisAdd BLAST16
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000041688417 – 805Cation channel sperm-associated protein subunit deltaAdd BLAST789

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi469N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi535N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
E9Q9F6

PRoteomics IDEntifications database

More...
PRIDEi
E9Q9F6

PTM databases

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
E9Q9F6

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Testis-specific.1 Publication

<p>This subsection of the ‘Expression’ section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified ‘at the protein level’.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Expressed in spermatocytes and spermatids in different stages of spermatogenesis (at protein level).1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000040828 Expressed in 43 organ(s), highest expression level in testis

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
E9Q9F6 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the CatSper complex.1 Publication

Protein-protein interaction databases

CORUM comprehensive resource of mammalian protein complexes

More...
CORUMi
E9Q9F6

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000108603

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CATSPERD family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IM5Q Eukaryota
ENOG4112B54 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000162714

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG069970

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E9Q9F6

KEGG Orthology (KO)

More...
KOi
K16895

Identification of Orthologs from Complete Genome Data

More...
OMAi
TRLIKHP

Database of Orthologous Groups

More...
OrthoDBi
213907at2759

TreeFam database of animal gene trees

More...
TreeFami
TF337973

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR028751 CATSPERD/E

The PANTHER Classification System

More...
PANTHERi
PTHR33722 PTHR33722, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15020 CATSPERD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: E9Q9F6-1) [UniParc]FASTAAdd to basket
Also known as: Tmem146-l, l

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MLVLMLAAAV ATMVRAHTLC RVHTVRTGKV FKSNIQLQGD PLFYAFPNTF
60 70 80 90 100
VLKNVCKADI SVYLGQKVFL TIDNFESSLL PLTVPKSLAV GVPSITSAHF
110 120 130 140 150
VSGSLVLFVI SGKGYSYDYY ENTWRKLEGI SEPVSHISGD VCCFKGSFCL
160 170 180 190 200
ELSNNLFAYL RGGQIPGTNI YFSDNGGFSF QLMNTDKLSH LTGTLGGIFH
210 220 230 240 250
LHSMSQVGVL MVENNLGTFH YMEYPLNHSM GIAFSYKNLL EVIMKPYQRG
260 270 280 290 300
FMVLWNQKSI LVSSNSGQIV EHVRLIDQKI FTDLDVEHAN INIYSVASNA
310 320 330 340 350
YELAFLVAED HLYYGSQSYM GTYVIKLPHQ PLWSTHTSIY FEDIGILQVL
360 370 380 390 400
TPVADPHFAA YDFDKCTVNV QSSLMDEKLA LQPCNVELLE STMINTMFTI
410 420 430 440 450
DMNSKLKLSA LMIPRKGENP TPLVMVSNPH ALGFKANLNE FGNTFDGNSK
460 470 480 490 500
YKLDIELKQQ HHWGNSDFNF TASIKRHAIS SVTVDIADKT LSCVDLKPLS
510 520 530 540 550
TLISVGCDMT KKIVVQNKIS ACTMGILNPV QLQKNYTYTI EKEAYDPINH
560 570 580 590 600
NGEAQDDLIV FYEYKDLGCP RLVYYDKPWK PVVELWKNGI VEEIMNAEYV
610 620 630 640 650
ISEINGLVTY SYSLTAATAN CRSQPQNWST FESDIENEEP FLWNRENYVS
660 670 680 690 700
CHEDNKDNPL LWPNVEYQVL GGQTNNKIIF GQRNGIYTFH LSVVDPYYSY
710 720 730 740 750
CNLNTIFSVY VHGALPVTKF QPLLTILLMV TTTLLTAWLA YAIPKQLRSE
760 770 780 790 800
KGQRLLGFCY QILQLCLGVC FCTWLRGKLR QWLRPRRVKD QNRGKVRVAQ

KHPET
Length:805
Mass (Da):91,096
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB66F82B2D928C08C
GO
Isoform 2 (identifier: E9Q9F6-2) [UniParc]FASTAAdd to basket
Also known as: Tmem146-s, s

The sequence of this isoform differs from the canonical sequence as follows:
     1-182: Missing.
     385-385: N → NVELLESTMINTMFTIDMNSKLKLSALMIPRKGENPTPL

Show »
Length:661
Mass (Da):75,404
Checksum:i4630D1DE6AEED3B1
GO
Isoform 3 (identifier: E9Q9F6-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     386-423: Missing.

Show »
Length:767
Mass (Da):86,836
Checksum:iB41B360E5DAB044F
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A3B2WD76A0A3B2WD76_MOUSE
Cation channel sperm-associated pro...
Catsperd
505Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAI16634 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence BAC36602 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence EDL38183 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti112G → V in ADU32560 (PubMed:21224844).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0429801 – 182Missing in isoform 2. 1 PublicationAdd BLAST182
Alternative sequenceiVSP_042981385N → NVELLESTMINTMFTIDMNS KLKLSALMIPRKGENPTPL in isoform 2. 1 Publication1
Alternative sequenceiVSP_042982386 – 423Missing in isoform 3. 2 PublicationsAdd BLAST38

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
HQ441159 mRNA Translation: ADU32560.1
HQ441160 mRNA Translation: ADU32561.1
CT010491 Genomic DNA No translation available.
CT485788 Genomic DNA No translation available.
CH466537 Genomic DNA Translation: EDL38183.1 Sequence problems.
AK077082 mRNA Translation: BAC36602.1 Different initiation.
BC115864 mRNA Translation: AAI15865.1
BC116633 mRNA Translation: AAI16634.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS50153.1 [E9Q9F6-1]

NCBI Reference Sequences

More...
RefSeqi
NP_780559.2, NM_175350.3 [E9Q9F6-1]

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.23401

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000112979; ENSMUSP00000108603; ENSMUSG00000040828 [E9Q9F6-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
106757

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:106757

UCSC genome browser

More...
UCSCi
uc008dcr.2 mouse [E9Q9F6-3]
uc008dcs.2 mouse [E9Q9F6-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ441159 mRNA Translation: ADU32560.1
HQ441160 mRNA Translation: ADU32561.1
CT010491 Genomic DNA No translation available.
CT485788 Genomic DNA No translation available.
CH466537 Genomic DNA Translation: EDL38183.1 Sequence problems.
AK077082 mRNA Translation: BAC36602.1 Different initiation.
BC115864 mRNA Translation: AAI15865.1
BC116633 mRNA Translation: AAI16634.1 Different initiation.
CCDSiCCDS50153.1 [E9Q9F6-1]
RefSeqiNP_780559.2, NM_175350.3 [E9Q9F6-1]
UniGeneiMm.23401

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

CORUMiE9Q9F6
STRINGi10090.ENSMUSP00000108603

Protein family/group databases

TCDBi1.A.1.19.3 the voltage-gated ion channel (vic) superfamily

PTM databases

PhosphoSitePlusiE9Q9F6

Proteomic databases

PaxDbiE9Q9F6
PRIDEiE9Q9F6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000112979; ENSMUSP00000108603; ENSMUSG00000040828 [E9Q9F6-1]
GeneIDi106757
KEGGimmu:106757
UCSCiuc008dcr.2 mouse [E9Q9F6-3]
uc008dcs.2 mouse [E9Q9F6-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
257062
MGIiMGI:2147030 Catsperd

Phylogenomic databases

eggNOGiENOG410IM5Q Eukaryota
ENOG4112B54 LUCA
GeneTreeiENSGT00940000162714
HOVERGENiHBG069970
InParanoidiE9Q9F6
KOiK16895
OMAiTRLIKHP
OrthoDBi213907at2759
TreeFamiTF337973

Enzyme and pathway databases

ReactomeiR-MMU-1300642 Sperm Motility And Taxes

Miscellaneous databases

Protein Ontology

More...
PROi
PR:E9Q9F6

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000040828 Expressed in 43 organ(s), highest expression level in testis
GenevisibleiE9Q9F6 MM

Family and domain databases

InterProiView protein in InterPro
IPR028751 CATSPERD/E
PANTHERiPTHR33722 PTHR33722, 1 hit
PfamiView protein in Pfam
PF15020 CATSPERD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCTSRD_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E9Q9F6
Secondary accession number(s): E7DZL7
, E7DZL8, E9Q710, Q1JPR3, Q1LZJ6, Q8C5U5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2012
Last sequence update: April 5, 2011
Last modified: January 16, 2019
This is version 55 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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