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Protein
Submitted name:

Zinc finger, MYND-type-containing 8

Gene

Zmynd8

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, MYND-type-containing 8Imported
Gene namesi
Name:Zmynd8Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918025 Zmynd8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiE9Q8D1
PaxDbiE9Q8D1
PRIDEiE9Q8D1

Expressioni

Gene expression databases

BgeeiENSMUSG00000039671 Expressed in 289 organ(s), highest expression level in metanephric loop of Henle
ExpressionAtlasiE9Q8D1 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104889

Structurei

3D structure databases

ProteinModelPortaliE9Q8D1
SMRiE9Q8D1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini108 – 153PHD-typeInterPro annotationAdd BLAST46
Domaini185 – 255BromoInterPro annotationAdd BLAST71
Domaini297 – 347PWWPInterPro annotationAdd BLAST51
Domaini1008 – 1042MYND-typeInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili537 – 557Sequence analysisAdd BLAST21
Coiled coili940 – 1004Sequence analysisAdd BLAST65

Keywords - Domaini

BromodomainPROSITE-ProRule annotation, Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITRI Eukaryota
ENOG410XSDA LUCA
GeneTreeiENSGT00910000144099

Family and domain databases

CDDicd05508 Bromo_RACK7, 1 hit
cd05841 BS69_related, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR000313 PWWP_dom
IPR037967 RACK7_Bromo_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR021931 ZMYND8
IPR035505 ZMYND8/11_PWWP
IPR011011 Znf_FYVE_PHD
IPR002893 Znf_MYND
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF12064 DUF3544, 1 hit
PF00855 PWWP, 1 hit
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00249 PHD, 1 hit
SM00293 PWWP, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50014 BROMODOMAIN_2, 1 hit
PS50812 PWWP, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.Show allAlign All

E9Q8D1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSAAGSLLLS SFGTEEPGSL SGQAASMADP VSTEKTAPKR RFPSPPHSSN
60 70 80 90 100
GHSPQDSSTS PIKKKKKPGL LNSSNKEQSE LRHGPFYYMK QPLTTDPVDV
110 120 130 140 150
VPQDGRNDFY CWVCHREGQV LCCELCPRVY HAKCLRLTSE PEGDWFCPEC
160 170 180 190 200
EKITVAECIE TQSKAMTMLT IEQLSYLLKF AIQKMKQPGT DAFQKPVPLE
210 220 230 240 250
QHPDYAEYIF HPMDLCTLEK NAKKKMYGCT EAFLADAKWI LHNCIIYNGG
260 270 280 290 300
NHKLTQIAKV VIKICEHEMN EIEVCPECYL AACQKRDNWF CEPCSNPHPL
310 320 330 340 350
VWAKLKGFPF WPAKALRDKD GQVDARFFGQ HDRAWVPVNN CYLMSKEIPF
360 370 380 390 400
SVKKTKSIFN SAMQEMEVYV ENIRRKFGVF NYSPFRTPYT PNNQYQMLLD
410 420 430 440 450
PSNPSAGTAK TDKQEKVKLN FDMTASPKIL LSKPLLSGGA GRRISLSDMP
460 470 480 490 500
RSPTSTNSSV HTGSDVEQDP EKKAPSSHFS ASEESMDFLD KSTASPASTK
510 520 530 540 550
TGQAGSLSGS PKPFSPQAPT PIMTKPDKTS TSTTGSILNL NLDRSKAEMD
560 570 580 590 600
LKELSESVQQ QSAPVPLISP KRQIRSRFQL NLDKTIESCK AQLGINEISE
610 620 630 640 650
DVYTAVEHSD SEDSEKSESS DSEYVSDEEQ KPKNEPEDPE DKEGSRVDKE
660 670 680 690 700
APAIKRKPKP TNQVEVKEEA KSNSPVSEKP DPTPAKDKAS PEPEKDFVEK
710 720 730 740 750
AKPSPHPTKD KLKGKDETDS PTVHLGLDSD SESELVIDLG EDPSGREGRK
760 770 780 790 800
NKKDPKVPSP KQDAIGKPPP SSTSAGNQSP PETPVLTRSA TQAPAAGVTV
810 820 830 840 850
AAATTSTMST VTVTAPATAV TGSPVKKQRP LLPKETVPAV QRVVWNASTV
860 870 880 890 900
QQKEVTQSPS TSTITLVTST QPAALVSSSG SASTLASAIN ADLPIATASA
910 920 930 940 950
DVAADIAKYT SKMMDAIKGT MTEIYNDLSK NTTGSTIAEI RRLRIEIEKL
960 970 980 990 1000
QWLHQQELAE MKHNLELTMA EMRQSLEQER DRLIAEVKKQ LELEKQQAVD
1010 1020 1030 1040 1050
ETKKKQWCAN CKKEAIFYCC WNTSYCDYPC QQAHWPEHMK SCTQSATAPQ
1060 1070 1080 1090 1100
QEADAEASTE TGNKSSQGNS SNTQSAPSEP ASAPKEKEAP AEKSKDSSNS
1110 1120 1130 1140 1150
TLDLSGSRET PSSMLLGSNQ SSVSKRCDKQ PAYTPTTTDH QPHPNYPAQK
1160 1170 1180 1190
YHSRSSKAGL WSSSEEKRAS SRSEHSGGTS TKNLMPKESR ESRLDAFWD
Length:1,199
Mass (Da):131,911
Last modified:October 3, 2012 - v2
Checksum:i074431EC348C63CE
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q3UH28Q3UH28_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8 Prkcbp1
1,154Annotation score:
Q3U1M7Q3U1M7_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8 Prkcbp1
1,174Annotation score:
A2A484A2A484_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
1,235Annotation score:
A2A482A2A482_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
1,206Annotation score:
A2A483A2A483_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
1,179Annotation score:
A2A485A2A485_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
1,094Annotation score:
A2A481A2A481_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
472Annotation score:
A2A480A2A480_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
492Annotation score:
A2A486A2A486_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
191Annotation score:
A2A479A2A479_MOUSE
Zinc finger, MYND-type-containing 8
Zmynd8
47Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589902 Genomic DNA No translation available.
AL591712 Genomic DNA No translation available.
AL928840 Genomic DNA No translation available.
RefSeqiNP_001239514.1, NM_001252585.1
UniGeneiMm.227598

Genome annotation databases

EnsembliENSMUST00000109266; ENSMUSP00000104889; ENSMUSG00000039671
GeneIDi228880
UCSCiuc008nya.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589902 Genomic DNA No translation available.
AL591712 Genomic DNA No translation available.
AL928840 Genomic DNA No translation available.
RefSeqiNP_001239514.1, NM_001252585.1
UniGeneiMm.227598

3D structure databases

ProteinModelPortaliE9Q8D1
SMRiE9Q8D1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104889

Proteomic databases

MaxQBiE9Q8D1
PaxDbiE9Q8D1
PRIDEiE9Q8D1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000109266; ENSMUSP00000104889; ENSMUSG00000039671
GeneIDi228880
UCSCiuc008nya.2 mouse

Organism-specific databases

CTDi23613
MGIiMGI:1918025 Zmynd8

Phylogenomic databases

eggNOGiENOG410ITRI Eukaryota
ENOG410XSDA LUCA
GeneTreeiENSGT00910000144099

Miscellaneous databases

ChiTaRSiZmynd8 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000039671 Expressed in 289 organ(s), highest expression level in metanephric loop of Henle
ExpressionAtlasiE9Q8D1 baseline and differential

Family and domain databases

CDDicd05508 Bromo_RACK7, 1 hit
cd05841 BS69_related, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR000313 PWWP_dom
IPR037967 RACK7_Bromo_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR021931 ZMYND8
IPR035505 ZMYND8/11_PWWP
IPR011011 Znf_FYVE_PHD
IPR002893 Znf_MYND
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF12064 DUF3544, 1 hit
PF00855 PWWP, 1 hit
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00249 PHD, 1 hit
SM00293 PWWP, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50014 BROMODOMAIN_2, 1 hit
PS50812 PWWP, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q8D1_MOUSE
AccessioniPrimary (citable) accession number: E9Q8D1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: October 3, 2012
Last modified: September 12, 2018
This is version 66 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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