Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 59 (16 Jan 2019)
Sequence version 1 (05 Apr 2011)
Previous versions | rss
Other tutorials and videosHelp videoFeedback
Protein

Biorientation of chromosomes in cell division protein 1-like 1

Gene

Bod1l

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Component of the fork protection machinery required to protect stalled/damaged replication forks from uncontrolled DNA2-dependent resection. Acts by stabilizing RAD51 at stalled replication forks and protecting RAD51 nucleofilaments from the antirecombinogenic activities of FBH1 and BLM. Does not regulate spindle orientation.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi2807 – 2819A.T hookSequence analysisAdd BLAST13

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processDNA damage, DNA repair

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Biorientation of chromosomes in cell division protein 1-like 1Curated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Bod1lImported
Synonyms:Kiaa13271 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2444804 Bod1l

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004341111 – 3032Biorientation of chromosomes in cell division protein 1-like 1Add BLAST3032

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei264PhosphoserineBy similarity1
Modified residuei471N6-acetyllysineBy similarity1
Modified residuei480PhosphoserineCombined sources1
Modified residuei482PhosphoserineCombined sources1
Modified residuei534N6-acetyllysineCombined sources1
Modified residuei632PhosphoserineBy similarity1
Modified residuei656PhosphoserineCombined sources1
Modified residuei657PhosphothreonineCombined sources1
Modified residuei1071PhosphoserineBy similarity1
Modified residuei1138PhosphoserineBy similarity1
Modified residuei1315PhosphoserineBy similarity1
Modified residuei1364PhosphoserineCombined sources1
Modified residuei1676PhosphoserineCombined sources1
Modified residuei1685PhosphoserineCombined sources1
Modified residuei1989PhosphoserineCombined sources1
Modified residuei2001PhosphoserineCombined sources1
Modified residuei2092PhosphoserineBy similarity1
Modified residuei2166PhosphoserineBy similarity1
Modified residuei2417PhosphoserineBy similarity1
Modified residuei2443PhosphoserineBy similarity1
Modified residuei2554PhosphoserineCombined sources1
Modified residuei2681PhosphoserineCombined sources1
Modified residuei2840PhosphoserineBy similarity1
Modified residuei2841PhosphoserineCombined sources1
Modified residuei2888PhosphoserineCombined sources1
Modified residuei2890PhosphothreonineBy similarity1
Modified residuei2892PhosphoserineBy similarity1
Modified residuei2898PhosphoserineBy similarity1
Modified residuei2907PhosphoserineBy similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes <strong>covalent linkages</strong> of various types formed <strong>between two proteins (interchain cross-links)</strong> or <strong>between two parts of the same protein (intrachain cross-links)</strong>, except the disulfide bonds that are annotated in the <a href="http://www.uniprot.org/manual/disulfid">'Disulfide bond'</a> subsection.<p><a href='/help/crosslnk' target='_top'>More...</a></p>Cross-linki2915Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity
Cross-linki2916Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity
Modified residuei2920PhosphoserineBy similarity1
Modified residuei3000PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
E9Q6J5

MaxQB - The MaxQuant DataBase

More...
MaxQBi
E9Q6J5

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
E9Q6J5

PeptideAtlas

More...
PeptideAtlasi
E9Q6J5

PRoteomics IDEntifications database

More...
PRIDEi
E9Q6J5

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
E9Q6J5

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
E9Q6J5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000061755 Expressed in 270 organ(s), highest expression level in bone marrow

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
E9Q6J5 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
E9Q6J5, 2 interactors

Molecular INTeraction database

More...
MINTi
E9Q6J5

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000058618

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
E9Q6J5

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the BOD1 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IKUQ Eukaryota
ENOG4111M2Q LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000156198

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000112474

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG104829

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E9Q6J5

Identification of Orthologs from Complete Genome Data

More...
OMAi
HAKSEPS

Database of Orthologous Groups

More...
OrthoDBi
1333373at2759

TreeFam database of animal gene trees

More...
TreeFami
TF335808

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR026955 Bod1-like

The PANTHER Classification System

More...
PANTHERi
PTHR31532 PTHR31532, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: E9Q6J5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MATNPQPQPP PPAPPPPPPQ PQPPPPPPGP GAGPGASGPG SAGAGAGDPQ
60 70 80 90 100
LVAMIVNHLK SQGLFDQFRR DCLADVDTKP AYQNLRQRVD NFVANHLATH
110 120 130 140 150
TWSPHLNKNQ LRNNIRQQVL KSGMLESGID RIISQVVDPK INHTFRPQVE
160 170 180 190 200
KAVHEFLATL NHKEEAAGST APDDEKPESS VITQGAPAPG PSANVASDAM
210 220 230 240 250
SILETITSLN QEANAARAST EMSNAKVSER TSRKLSSQPS TDVSTDKERG
260 270 280 290 300
SEDATEREKA TSDSGGDGLE AALKSEEPSD LPCPVEETKN HMKENNSLLL
310 320 330 340 350
LSKDAQQEST DPKIKSMDKG EKKPDGNEKG ERKKEKKEKT EKKIDHSKRN
360 370 380 390 400
EDTQKVKDER QAKDKEVEST KLPSEKSNSR ARAAEGTKED CSLLDSDVDG
410 420 430 440 450
LTDITVSSVH TSDLSSFEED TEEEVVVSES MEEGEITSED EEKNKQNKAK
460 470 480 490 500
VQPGDSSDGK ARGVRHAYVH KPYLYSKYYS DSDDELTVEQ RRQSIAKEKE
510 520 530 540 550
ERLLRRRINR EKLEEKRKQK AEKTKSSKVK SQGKSTVDLE DSSAKTLEPK
560 570 580 590 600
APRIKEVLKE RKVLEKKVAL SKRRRKDSRN VDENSKKKPQ AEEESKEALK
610 620 630 640 650
TTEYCEKEKA SSKDLRHTHG KGEPSRPARR LSESLHSADE NKTESKVERE
660 670 680 690 700
YKRRTSTPVI LEGAQEETDT RDGKKQPERS ETNVEETQKQ KSTLKNEKYQ
710 720 730 740 750
KKDDPETHGK GLPKKEAKSA KERPEKEKAQ SEDKPSSKHK HKGDSVHKMS
760 770 780 790 800
DETELHSSEK GETEESVRKQ GQQTKLSSDD RTERKSKHKS ERRLSVLGRD
810 820 830 840 850
GKPVSEYTIK TDEHARKDNK KEKHLSSEKS KAEHKSRRSS DSKLQKDALS
860 870 880 890 900
SKQHSVTSQK RSESCSEDKC ETDSTNADSS FKPEELPHKE RRRTKSLLED
910 920 930 940 950
KVVSKSKSKG QSKQTKAAET EAQEGVTRQV TTPKPDKEKN TEDNDTERQR
960 970 980 990 1000
KFKLEDRTSE ETVTDPALEN TVSSAHSAQK DSGHRAKLAS IKEKHKTDKD
1010 1020 1030 1040 1050
STSSKLERKV SDGHRSRSLK HSNKDMKKKE ENKPDDKNGK EVDSSHEKGR
1060 1070 1080 1090 1100
GNGPVTEKKL SRRLCENRRG STSQEMAKED KLVANMSGTT SSSSLQRPKK
1110 1120 1130 1140 1150
STETTSIPEQ EPMEIDSEAA VENVSELSKT EDISSNSSQQ DTDFENVTKH
1160 1170 1180 1190 1200
KATAGVLKDE FRTSMVDSKP AAAVTCKSGR GLAVTSISER HADHKSTLTK
1210 1220 1230 1240 1250
KVHSQGNPSK AAPREREPIQ RGAQEVSVDS EVSRKALSRA PSENEKGQKN
1260 1270 1280 1290 1300
LKGMSKTTEE CGTHRNASLE YSTDSDLLSS SGSVTVVPQK ESHNSNTIPV
1310 1320 1330 1340 1350
IDREAISEGG RASTSLANHS DVPNQYSTVK KSEVHKTNGS KEGNDGFTVD
1360 1370 1380 1390 1400
MPTKANGGSK RHLSEDSQAT LLYSKESKIS IPLADKSMSV TGDNKNINKQ
1410 1420 1430 1440 1450
RSLMGTAKRE SDLKVNPDIK QDSAAGEHVV DLSTRKEAET VRRKHNKEIP
1460 1470 1480 1490 1500
TDVERKTENS EVDTSARRDS APVPQQRHGK MERGAAGSGR RDKAFIATST
1510 1520 1530 1540 1550
EGTDKGIMLN TVKTGDATTT SSEVGEKGTA LPCTSIEADE GFMMGACPKK
1560 1570 1580 1590 1600
HPLQVGAEAS ECTVFAAAEE GKGVVTEGFA ESEILLTSSK EGESGECAVA
1610 1620 1630 1640 1650
ESEDRVAGPL AAHTVQAEAN VNSITTEEKD DAVTSAGSEE KCGGSACTVE
1660 1670 1680 1690 1700
GTATFIGEVE SDGAVTSAGT EIRAGSLSSE DVDGSQENRI QVGPKKETEG
1710 1720 1730 1740 1750
TVTCTETKGR NDNFICLVTR VETQEQRVVT GADVVQVNAA KPQEANANQG
1760 1770 1780 1790 1800
DGSGTDGAEG ESAVTSTGIT EEDGEASANC TGSEDNREGC AISSETEESA
1810 1820 1830 1840 1850
ESAMDSTEAK DITNAPLVAA GPCDDEGIVT STGAKEEDDE DEGVVTSTGR
1860 1870 1880 1890 1900
GNEPGHASAC TGIEESEGMM VCESGEGGAQ IGPTIDHVNA EAGAATVNTN
1910 1920 1930 1940 1950
DSNVDSMSGA EKEIKDTNIC SSAKGIVESS VTSALAGNSD RPPVLCGSEG
1960 1970 1980 1990 2000
PMASASSHHS DSQLTRKETV EDTTISTGLV KGSDDVLVSG EVPECEVGHM
2010 2020 2030 2040 2050
SPRKNEECDG LMASTASCDV SNKDSLAGSK SQGNGLMIST STNACTPQIS
2060 2070 2080 2090 2100
AVIDVRGGHL STLSTEEIRD GVRVHREGFE APMPSAVSGE NSQLTASRSE
2110 2120 2130 2140 2150
EKDECAMIST SIGEEFELPI SSAVTVTCAE RQQPVAAVEE STTGPALVST
2160 2170 2180 2190 2200
EDFEVPMPSA PTEAESPLAS TSKEEKDECA LISTSIAEEC EASVFGVSRN
2210 2220 2230 2240 2250
APSVTDGNAV ISTSSVEDCE GSVSSAVPQE SVCPSVIPVE ETGDTAMIST
2260 2270 2280 2290 2300
STSEGREAVM VGTIPTDDDQ ATTVRGEDLS DAAIISTSTA ECVLTCTSLS
2310 2320 2330 2340 2350
RHEENQQATH NPEGNGGHLA TKQSKCELPM PSLVAERNCK CPGPFRMGKG
2360 2370 2380 2390 2400
VGPLMAVGTR GEHDRLPVCE PSVGQGQPGT ALCLGEEESH GMDCPGQDLN
2410 2420 2430 2440 2450
AKERNTLLSS VQRESKSAEA EAAGDSSTAR RTVRKDSERN ANSLSETNCL
2460 2470 2480 2490 2500
REPEQKPAED TSGSTHCLTA VNPGAEADGM LPITHAALEY PDHQEPESNL
2510 2520 2530 2540 2550
KTTTKCITGQ ESQMPSSHTG VLSAVCHVAP CASEQEGGLP TKSDHSGTWT
2560 2570 2580 2590 2600
SEGSPEKMGH VAGARQSFHR EGNLDVTLPP EDNGCGVGNE ESPPKGIGGL
2610 2620 2630 2640 2650
ELSTGLTTEI SVSSEEDTSH GVVAAPENPC VGRRRGAAEL QMEALLMRES
2660 2670 2680 2690 2700
LNVEKSESRI NEEIHFESQN KEEICCGRKG STEALSGCSV EADPEEVEEE
2710 2720 2730 2740 2750
EKQISQRNRK PDYSSSEEEL DDSPDVLDSR IETAQRQYSE TEPHDTKEEN
2760 2770 2780 2790 2800
SGDVEEFSSV TSKTNSSTGL EDRDEFSSSE GTGEKTEPNE DDGSIKSQED
2810 2820 2830 2840 2850
DHPIIIKRRR GRPRKYPAET AFKSKEDSKT ETDITTVEQS SPSGKLKVSQ
2860 2870 2880 2890 2900
ADESNKEIAN LEEKSTSNDD SEEKTASMRL RGRKPKRSLT SSDDAESSEP
2910 2920 2930 2940 2950
ERKRQKSVSE TSEDKKDEES DEEEEEEEEE EPLGATTRSA TRSEAQRKNH
2960 2970 2980 2990 3000
SKPSTRATSK LGIPETISPR NRQKLAKEKL STSEKVSKSP PLGRSKAQLS
3010 3020 3030
PSVKRKREVS PPGARTRGQQ KVDENPLKKA KR
Length:3,032
Mass (Da):327,453
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i095613921911B8D5
GO
Isoform 2 (identifier: E9Q6J5-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     2947-2993: Missing.

Show »
Length:2,985
Mass (Da):322,301
Checksum:i181A9BB9E39D68A2
GO
Isoform New (identifier: E9Q6J5-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     2588-2589: GN → VLLGS

Show »
Length:3,035
Mass (Da):327,751
Checksum:i62351F731B57EE74
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAB69856 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence BAE24214 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence BAE37191 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti864S → R in BAE24214 (PubMed:16141072).Curated1
Sequence conflicti887P → H in BAE24214 (PubMed:16141072).Curated1
Sequence conflicti1811 – 1812DI → AL in AAB69856 (PubMed:8686505).Curated2
Sequence conflicti2017S → G in AAB69856 (PubMed:8686505).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0579022588 – 2589GN → VLLGS in isoform New. 2
Alternative sequenceiVSP_0579032947 – 2993Missing in isoform 2. Add BLAST47

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC102858 Genomic DNA No translation available.
AC157932 Genomic DNA No translation available.
AK046296 mRNA Translation: BAC32675.1
AK079548 mRNA Translation: BAC37680.1
AK140021 mRNA Translation: BAE24214.1 Different initiation.
AK163093 mRNA Translation: BAE37191.1 Different initiation.
AF013969 mRNA Translation: AAB69856.1 Different initiation.
AK122495 mRNA Translation: BAC65777.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS39079.1 [E9Q6J5-1]
CCDS80273.1 [E9Q6J5-2]

Protein sequence database of the Protein Information Resource

More...
PIRi
T03730

NCBI Reference Sequences

More...
RefSeqi
NP_001074891.1, NM_001081422.3 [E9Q6J5-1]
NP_001297530.1, NM_001310601.1 [E9Q6J5-2]

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.158726

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000050556; ENSMUSP00000058618; ENSMUSG00000061755 [E9Q6J5-1]
ENSMUST00000202908; ENSMUSP00000144359; ENSMUSG00000061755 [E9Q6J5-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
665775

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:665775

UCSC genome browser

More...
UCSCi
uc008xhd.3 mouse [E9Q6J5-1]
uc008xhg.1 mouse

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC102858 Genomic DNA No translation available.
AC157932 Genomic DNA No translation available.
AK046296 mRNA Translation: BAC32675.1
AK079548 mRNA Translation: BAC37680.1
AK140021 mRNA Translation: BAE24214.1 Different initiation.
AK163093 mRNA Translation: BAE37191.1 Different initiation.
AF013969 mRNA Translation: AAB69856.1 Different initiation.
AK122495 mRNA Translation: BAC65777.1
CCDSiCCDS39079.1 [E9Q6J5-1]
CCDS80273.1 [E9Q6J5-2]
PIRiT03730
RefSeqiNP_001074891.1, NM_001081422.3 [E9Q6J5-1]
NP_001297530.1, NM_001310601.1 [E9Q6J5-2]
UniGeneiMm.158726

3D structure databases

SMRiE9Q6J5
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiE9Q6J5, 2 interactors
MINTiE9Q6J5
STRINGi10090.ENSMUSP00000058618

PTM databases

iPTMnetiE9Q6J5
PhosphoSitePlusiE9Q6J5

Proteomic databases

jPOSTiE9Q6J5
MaxQBiE9Q6J5
PaxDbiE9Q6J5
PeptideAtlasiE9Q6J5
PRIDEiE9Q6J5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000050556; ENSMUSP00000058618; ENSMUSG00000061755 [E9Q6J5-1]
ENSMUST00000202908; ENSMUSP00000144359; ENSMUSG00000061755 [E9Q6J5-2]
GeneIDi665775
KEGGimmu:665775
UCSCiuc008xhd.3 mouse [E9Q6J5-1]
uc008xhg.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
665775
MGIiMGI:2444804 Bod1l

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiENOG410IKUQ Eukaryota
ENOG4111M2Q LUCA
GeneTreeiENSGT00940000156198
HOGENOMiHOG000112474
HOVERGENiHBG104829
InParanoidiE9Q6J5
OMAiHAKSEPS
OrthoDBi1333373at2759
TreeFamiTF335808

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Bod1l mouse

Protein Ontology

More...
PROi
PR:E9Q6J5

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000061755 Expressed in 270 organ(s), highest expression level in bone marrow
GenevisibleiE9Q6J5 MM

Family and domain databases

InterProiView protein in InterPro
IPR026955 Bod1-like
PANTHERiPTHR31532 PTHR31532, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiBD1L1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E9Q6J5
Secondary accession number(s): O35243
, Q3TR39, Q3USW6, Q80TF0, Q8BHG7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: April 5, 2011
Last modified: January 16, 2019
This is version 59 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again