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UniProtKB - E9Q5B4 (E9Q5B4_MOUSE)
Protein
Submitted name:
Zinc finger SCAN domains 29
Gene
Zscan29
Organism
Mus musculus (Mouse)
Status
Functioni
May be involved in transcriptional regulation.
ARBA annotationGO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- metal ion binding Source: UniProtKB-KW
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: GO_Central
- sequence-specific double-stranded DNA binding Source: MGI
GO - Biological processi
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Zinc finger SCAN domains 29Imported |
Gene namesi | Name:Zscan29Imported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:2139317, Zscan29 |
VEuPathDBi | HostDB:ENSMUSG00000050619 |
Subcellular locationi
Nucleus
- Nucleus PROSITE-ProRule annotation
Nucleus
- nucleus Source: UniProtKB-SubCell
Keywords - Cellular componenti
NucleusPROSITE-ProRule annotationARBA annotationExpressioni
Gene expression databases
Bgeei | ENSMUSG00000050619, Expressed in dorsal pancreas and 169 other tissues |
ExpressionAtlasi | E9Q5B4, baseline and differential |
Genevisiblei | E9Q5B4, MM |
Interactioni
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000125987 |
Miscellaneous databases
RNActi | E9Q5B4, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 17 – 98 | SCAN boxInterPro annotationAdd BLAST | 82 | |
Domaini | 700 – 727 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 728 – 755 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 756 – 783 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 784 – 811 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 812 – 839 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 840 – 867 | C2H2-typeInterPro annotationAdd BLAST | 28 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 96 – 117 | DisorderedSequence analysisAdd BLAST | 22 | |
Regioni | 339 – 399 | DisorderedSequence analysisAdd BLAST | 61 | |
Regioni | 524 – 578 | DisorderedSequence analysisAdd BLAST | 55 | |
Regioni | 619 – 638 | DisorderedSequence analysisAdd BLAST | 20 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 352 – 379 | Basic and acidic residuesSequence analysisAdd BLAST | 28 | |
Compositional biasi | 551 – 568 | Acidic residuesSequence analysisAdd BLAST | 18 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161523 |
HOGENOMi | CLU_002678_88_1_1 |
InParanoidi | E9Q5B4 |
PhylomeDBi | E9Q5B4 |
TreeFami | TF336839 |
Family and domain databases
CDDi | cd07936, SCAN, 1 hit |
Gene3Di | 1.10.4020.10, 1 hit |
InterProi | View protein in InterPro IPR044822, Myb_DNA-bind_4 IPR003309, SCAN_dom IPR038269, SCAN_sf IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF13837, Myb_DNA-bind_4, 2 hits PF02023, SCAN, 1 hit PF00096, zf-C2H2, 6 hits |
SMARTi | View protein in SMART SM00431, SCAN, 1 hit SM00355, ZnF_C2H2, 6 hits |
SUPFAMi | SSF57667, SSF57667, 4 hits |
PROSITEi | View protein in PROSITE PS50804, SCAN_BOX, 1 hit PS00028, ZINC_FINGER_C2H2_1, 6 hits PS50157, ZINC_FINGER_C2H2_2, 6 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All
E9Q5B4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAKPTRRGNG TSSESLRQRF RRFHYQEVAG PREAFSQLWE LCCRWLRPEV
60 70 80 90 100
RTKEQIVELL VLEQFLTVLP VEIQNWVQKQ CPENGEEAVT LVEDLERESG
110 120 130 140 150
RPGHSVTVSV KGQEMHSEKM TPLKSSQELL SVLQESVEPQ PKGVSKKERA
160 170 180 190 200
RRPALRLQEQ MNPKENLRPF QRSGFPFPKP NVVSRLDQGE PWISDLLSSK
210 220 230 240 250
EKDVPKGNTG TSLLPSKRER TCWVEQGHWV FDDEKVVGVH WGYKETRTLL
260 270 280 290 300
AILSQTEFYE ALRNCHRNSQ VYGAVAGRLR EYGFLRTLEQ CRTKFKGLQK
310 320 330 340 350
SYRKVKSGHP PDTCPFFEEM EALMSAQVIS LPINGLEEAA SHSAQAGSDA
360 370 380 390 400
ETEKPGQRDW QHEDGEEAIA ERSDSDDPEA TPQDPDNPPA PVLFRSPSVP
410 420 430 440 450
DENNLRKVYA GSHLECVHPA VLRAALSVAV GVGGVHWGYE ETKTYLAILS
460 470 480 490 500
ETQFYEALQN CHRNSQLYGT VAERLWEYGF LRTPEQCRTK FKSLQTSYRK
510 520 530 540 550
VKNGQALETC PFFEEMDALV SAQVAAPPSD DQEKETVSCC LQRTSEAEPE
560 570 580 590 600
KQDEDTEEDS DDEDDTEIPP EAVITRAPVL FQSPSGFEAG FENEENSKRD
610 620 630 640 650
ISEEVQLHRT LLARSERKIS HHVNQSKASK NKCSSESQWE KTQREEQRQL
660 670 680 690 700
AFPEKNIGKV LTYQRPGLED RPYKYVKYGK SSGSNSHLRY PVSHEVENPY
710 720 730 740 750
KCADCGKSFS RSARLIRHQR IHTGEKPYKC LDCGKGFRDS SNFITHRRIH
760 770 780 790 800
TGEKPYQCDE CGKRFNQSSS LIIHQRTHTG EKPYQCEECG KSFNNSSHFN
810 820 830 840 850
AHRRIHTGER PHVCPDCGKS FSKSSDLHAH HRTHTGKKPY GCHDCGKCFS
860
KSSALSKHRE THTREKLLS
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA2ARU5 | A2ARU5_MOUSE | Zinc finger SCAN domains 29 | Zscan29 | 834 | Annotation score: | ||
A2ARU6 | A2ARU6_MOUSE | Zinc finger SCAN domains 29 | Zscan29 | 548 | Annotation score: | ||
B7ZCX1 | B7ZCX1_MOUSE | Zinc finger SCAN domains 29 | Zscan29 | 206 | Annotation score: |
Genome annotation databases
Ensembli | ENSMUST00000163766; ENSMUSP00000125987; ENSMUSG00000050619 |
Similar proteinsi
Cross-referencesi
3D structure databases
SMRi | E9Q5B4 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000125987 |
Proteomic databases
PaxDbi | E9Q5B4 |
ProteomicsDBi | 320153 |
Protocols and materials databases
Antibodypediai | 11192, 114 antibodies from 21 providers |
Genome annotation databases
Ensembli | ENSMUST00000163766; ENSMUSP00000125987; ENSMUSG00000050619 |
Organism-specific databases
MGIi | MGI:2139317, Zscan29 |
VEuPathDBi | HostDB:ENSMUSG00000050619 |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161523 |
HOGENOMi | CLU_002678_88_1_1 |
InParanoidi | E9Q5B4 |
PhylomeDBi | E9Q5B4 |
TreeFami | TF336839 |
Miscellaneous databases
ChiTaRSi | Zscan29, mouse |
RNActi | E9Q5B4, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000050619, Expressed in dorsal pancreas and 169 other tissues |
ExpressionAtlasi | E9Q5B4, baseline and differential |
Genevisiblei | E9Q5B4, MM |
Family and domain databases
CDDi | cd07936, SCAN, 1 hit |
Gene3Di | 1.10.4020.10, 1 hit |
InterProi | View protein in InterPro IPR044822, Myb_DNA-bind_4 IPR003309, SCAN_dom IPR038269, SCAN_sf IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF13837, Myb_DNA-bind_4, 2 hits PF02023, SCAN, 1 hit PF00096, zf-C2H2, 6 hits |
SMARTi | View protein in SMART SM00431, SCAN, 1 hit SM00355, ZnF_C2H2, 6 hits |
SUPFAMi | SSF57667, SSF57667, 4 hits |
PROSITEi | View protein in PROSITE PS50804, SCAN_BOX, 1 hit PS00028, ZINC_FINGER_C2H2_1, 6 hits PS50157, ZINC_FINGER_C2H2_2, 6 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | E9Q5B4_MOUSE | |
Accessioni | E9Q5B4Primary (citable) accession number: E9Q5B4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 5, 2011 |
Last sequence update: | April 5, 2011 | |
Last modified: | January 19, 2022 | |
This is version 84 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |