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Protein
Submitted name:

Rearranged L-myc fusion sequence

Gene

Rlf

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • chromosome organization Source: MGI
  • DNA integration Source: MGI
  • histone H3-K4 monomethylation Source: MGI
  • regulation of DNA methylation Source: MGI

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Rearranged L-myc fusion sequenceImported
Gene namesi
Name:RlfImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:1924705 Rlf

PTM / Processingi

Proteomic databases

MaxQBiE9Q532
PaxDbiE9Q532
PRIDEiE9Q532

PTM databases

iPTMnetiE9Q532
PhosphoSitePlusiE9Q532

Expressioni

Gene expression databases

BgeeiENSMUSG00000049878 Expressed in 280 organ(s), highest expression level in saccule of membranous labyrinth
ExpressionAtlasiE9Q532 baseline and differential
GenevisibleiE9Q532 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000127068

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini471 – 498C2H2-typeInterPro annotationAdd BLAST28
Domaini557 – 587C2H2-typeInterPro annotationAdd BLAST31
Domaini600 – 627C2H2-typeInterPro annotationAdd BLAST28
Domaini628 – 657C2H2-typeInterPro annotationAdd BLAST30
Domaini657 – 686C2H2-typeInterPro annotationAdd BLAST30
Domaini687 – 716C2H2-typeInterPro annotationAdd BLAST30
Domaini839 – 864C2H2-typeInterPro annotationAdd BLAST26
Domaini1057 – 1080C2H2-typeInterPro annotationAdd BLAST24
Domaini1193 – 1223C2H2-typeInterPro annotationAdd BLAST31
Domaini1245 – 1275C2H2-typeInterPro annotationAdd BLAST31
Domaini1290 – 1320C2H2-typeInterPro annotationAdd BLAST31

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00890000139400
OMAiCKKIFAC

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 15 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 14 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

E9Q532-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MWHLIYYSNF ITYLHSYLHC RSCFELLLSV SESELPCEVW VPFLQSLQES
60 70 80 90 100
HDALLEFGNN NLQILVHVTK EGVWKNPILL KILSQQPVET EEVNKLIAQE
110 120 130 140 150
GPSFLQMRIK HLLKSNCIPQ ATALSKLCAE SKELAQVSCF QQAYITCLCS
160 170 180 190 200
MLPSEEAIQE IAKVDCKDVL DIICNLESEG QDNTAFVLCT TYLTQQLQTA
210 220 230 240 250
SVYCSWELTL FWSKLQRRID PSLETFLERC RQFGVIAKTQ QHLFCLIRVI
260 270 280 290 300
QTEAQDAGIG VSILLCVRAL QLRSSEDEEM KASVCKTISC LLPEDLEVRR
310 320 330 340 350
ACQLTEFLIE PSLDGFNMLE ELYLQPDQKF DEENAPVPNS LRCELLLALK
360 370 380 390 400
AHWPFDPEFW DWKTLKRHCH QLLGQEASDS DDDLSGYEMS INDTDVLESF
410 420 430 440 450
LSDYDDGKED KQYRRSLTDQ NKEKRDKKPI GSSERYQRWL QYKFFCLLCK
460 470 480 490 500
RECIEARILH HSKMHMEDGI YTCPVCIKKF KRKELFVPHV MEHVKMPPSR
510 520 530 540 550
SHRSRKKLLL KSAQRGIYPK SPTGSLEQNP EQARGESHEY VTFSKLEDRR
560 570 580 590 600
LQDRDLYPCP GTDCSRVFKQ FKYLSVHLKA EHQNNDENAK HYLDMKNRRE
610 620 630 640 650
KCTYCRRHFM SAFHLREHEQ VHCGPQPYMC VSIDCYARFG SVNELLNHKQ
660 670 680 690 700
KHDDLRYKCE LNGCNIVFSD LGQLYHHEAQ HFRDASYTCN VLGCKKFYYS
710 720 730 740 750
KIEYQNHLSM HNVESPDGEL KKSVKLEEPG AGGKQDCVDQ SHLLDETEKS
760 770 780 790 800
HSLEDHHLCP GSASAHIDTT ETLKDNSDSN SSDQLSHSSS TSITEELIDT
810 820 830 840 850
LDHSETMQDL LLSHEKVFVP SSLKDKCSNV AVCFDGTKFT CGFDGCGSTY
860 870 880 890 900
KNARGMQKHL RKVHPYHCKP RKIKTKDLFN CLDDKHNEAD KFDAEPKPSS
910 920 930 940 950
DTNSDSPDEG PDHSIHTKCK REHQGYSPEP SICASKRPCT EDTMLELLLR
960 970 980 990 1000
LKHLSLKNSI AHGSFSGSLQ GCPSSGAKSL QSVPSSISDV NLQNQDENMP
1010 1020 1030 1040 1050
SQYLAQLAAK PFFCELQGCK YEFVTREALL MHYLKKHNYS KEKVLQLTMF
1060 1070 1080 1090 1100
QHRYSPFRCH ICQRSFTRKT HLRIHYKNKH QIGSDRATHR LLDSEKCDHE
1110 1120 1130 1140 1150
GPCSVDRLKG DCSTELGPNS NSETTQCHSK KDECSSETDL ESSCEETESK
1160 1170 1180 1190 1200
ISGISSPIGS HREEGEEKEG RGSRRTVAKG NLCYILNKYH KPFHCIHKTC
1210 1220 1230 1240 1250
NSSFTNLKGL IRHYRTVHQY NKEQLCLEKD KARTKRELVK CKKLFACKYK
1260 1270 1280 1290 1300
DCNKRFLCSK ALAKHCSDSH NLDHIEESKV LSETESAARF SCNQPQCPAV
1310 1320 1330 1340 1350
FYSFSKLKHH LLEQHNIEGE IHSDYEIHCT LNGCGQIFSH RSNYFQHVYY
1360 1370 1380 1390 1400
RHKDYYDNLF SSQKVANERL LRSEKVCQTT QAQGLTQTQG QTQGQTQGQE
1410 1420 1430 1440 1450
QQAAKRPFNT KAKKCGLLKD KKAPITFKTR AEAIHMCVEH SEHTQYPCMV
1460 1470 1480 1490 1500
QGCLSVVKLE SSIVRHYKRT HQMNSAYLEQ QLENLVVCVK YGTKIKDEPP
1510 1520 1530 1540 1550
SEVEPCVKKE ESTSCESVHT ENGAPGDSSV PLPNTDSTCP AEQDVGQKGC
1560 1570 1580 1590 1600
SERNPVFDTH SLLYRGTLKC NHSSETTSLE QCNIAQSSPC KIESPIPNPS
1610 1620 1630 1640 1650
GTESGTYFTD FQLPLPRIKE EPGQHSSGQE NTVKNATQVP KENIRKHSQP
1660 1670 1680 1690 1700
RSFDLKTYKP MGFESSFLKF IQESEEKDDD FDDWEPSEHL TLNNSSHPSN
1710 1720 1730 1740 1750
DLTGNVVADT IVNESAPQVD IPHSSSDPPV SENLTAVPPL VVAEATAVPS
1760 1770 1780 1790 1800
LENLRVVLDK ALTDCGELAL KQLHYLRPVV VLERSKFSTP ILDLFPTKKT

DELCVGSS
Length:1,808
Mass (Da):206,278
Last modified:April 5, 2011 - v1
Checksum:iF422BC639AEBD36E
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A2A7F4A2A7F4_MOUSE
MCG122876
Rlf mCG_122876
1,918Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606927 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000168615; ENSMUSP00000127068; ENSMUSG00000049878
UCSCiuc008uoa.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606927 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000127068

PTM databases

iPTMnetiE9Q532
PhosphoSitePlusiE9Q532

Proteomic databases

MaxQBiE9Q532
PaxDbiE9Q532
PRIDEiE9Q532

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000168615; ENSMUSP00000127068; ENSMUSG00000049878
UCSCiuc008uoa.1 mouse

Organism-specific databases

MGIiMGI:1924705 Rlf

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00890000139400
OMAiCKKIFAC

Miscellaneous databases

ChiTaRSiRlf mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000049878 Expressed in 280 organ(s), highest expression level in saccule of membranous labyrinth
ExpressionAtlasiE9Q532 baseline and differential
GenevisibleiE9Q532 MM

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 15 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 14 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q532_MOUSE
AccessioniPrimary (citable) accession number: E9Q532
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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