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Protein
Submitted name:

Interferon, alpha-inducible protein 27

Gene

Ifi27

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • activation of cysteine-type endopeptidase activity involved in apoptotic process Source: GO_Central
  • apoptotic signaling pathway Source: GO_Central
  • negative regulation of transcription by RNA polymerase II Source: MGI
  • regulation of protein export from nucleus Source: MGI

Names & Taxonomyi

Protein namesi
Submitted name:
Interferon, alpha-inducible protein 27Imported
Gene namesi
Name:Ifi27Imported
Synonyms:Ifi27l1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 12

Organism-specific databases

MGIiMGI:1277180 Ifi27

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiE9Q1C5

Expressioni

Gene expression databases

BgeeiENSMUSG00000064215 Expressed in 247 organ(s), highest expression level in stria vascularis of cochlear duct
ExpressionAtlasiE9Q1C5 baseline and differential
GenevisibleiE9Q1C5 MM

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliE9Q1C5
SMRiE9Q1C5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410JFVP Eukaryota
ENOG410Z2RX LUCA
GeneTreeiENSGT00390000002592

Family and domain databases

Gene3Di1.10.246.160, 1 hit
InterProiView protein in InterPro
IPR009311 IFI6/IFI27-like
IPR038213 IFI6/IFI27-like_sf
PANTHERiPTHR16932 PTHR16932, 1 hit
PfamiView protein in Pfam
PF06140 Ifi-6-16, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

E9Q1C5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAFSGTGTLV ASIVSKMTSS AAMVKAGGAV SGTILAGSKG LILLTQSALG
60 70 80 90 100
SATSALGALK VGTILSGFSA STLAASPIGE EPALVGREKK SDFRFSFPAA
110 120 130 140 150
GKAARRQRKE GQSKIYLKGF EFSRAMTVAA VPPALSAVGF TASGIAASSL
160 170 180 190 200
AAKMMSLSAI ANGGGVPAGG LVAILQSAGA AGLSVPSTVI VGSAGSAVVA
210 220 230 240 250
SVMNICESFY PFLMGSEVAD MATEVADMAI EVADISTEEA LPNLSNTEKD
Length:250
Mass (Da):24,676
Last modified:April 5, 2011 - v1
Checksum:i04BA97C3BF4A690E
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q70LM9Q70LM9_MOUSE
ISG12a protein
Ifi27 D12Ertd647e, Ifi27l1, ISG12a
165Annotation score:
Q9D1E1Q9D1E1_MOUSE
ISG12a protein
Ifi27 D12Ertd647e, Ifi27l1, ISG12a
215Annotation score:
Q70LN0Q70LN0_MOUSE
ISG12a protein
Ifi27 D12Ertd647e, Ifi27l1, ISG12a
205Annotation score:
Q8C6G0Q8C6G0_MOUSE
Interferon, alpha-inducible protein...
Ifi27 D12Ertd647e, Ifi27l1
260Annotation score:
D3Z4L8D3Z4L8_MOUSE
Interferon, alpha-inducible protein...
Ifi27 Ifi27l1
105Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC154347 Genomic DNA No translation available.
RefSeqiNP_919042.2, NM_194066.2
UniGeneiMm.2121

Genome annotation databases

EnsembliENSMUST00000079294; ENSMUSP00000078275; ENSMUSG00000064215
GeneIDi52668
UCSCiuc007ovr.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC154347 Genomic DNA No translation available.
RefSeqiNP_919042.2, NM_194066.2
UniGeneiMm.2121

3D structure databases

ProteinModelPortaliE9Q1C5
SMRiE9Q1C5
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiE9Q1C5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000079294; ENSMUSP00000078275; ENSMUSG00000064215
GeneIDi52668
UCSCiuc007ovr.2 mouse

Organism-specific databases

CTDi3429
MGIiMGI:1277180 Ifi27

Phylogenomic databases

eggNOGiENOG410JFVP Eukaryota
ENOG410Z2RX LUCA
GeneTreeiENSGT00390000002592

Miscellaneous databases

ChiTaRSiIfi27l2a mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000064215 Expressed in 247 organ(s), highest expression level in stria vascularis of cochlear duct
ExpressionAtlasiE9Q1C5 baseline and differential
GenevisibleiE9Q1C5 MM

Family and domain databases

Gene3Di1.10.246.160, 1 hit
InterProiView protein in InterPro
IPR009311 IFI6/IFI27-like
IPR038213 IFI6/IFI27-like_sf
PANTHERiPTHR16932 PTHR16932, 1 hit
PfamiView protein in Pfam
PF06140 Ifi-6-16, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q1C5_MOUSE
AccessioniPrimary (citable) accession number: E9Q1C5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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