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Protein
Submitted name:

SR-related CTD-associated factor 11

Gene

Scaf11

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
SR-related CTD-associated factor 11Imported
Gene namesi
Name:Scaf11Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:1919443 Scaf11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiE9PZM7
PaxDbiE9PZM7
PeptideAtlasiE9PZM7
PRIDEiE9PZM7

PTM databases

iPTMnetiE9PZM7
PhosphoSitePlusiE9PZM7

Expressioni

Gene expression databases

BgeeiENSMUSG00000033228 Expressed in 286 organ(s), highest expression level in maxillary prominence
GenevisibleiE9PZM7 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000044898

Structurei

3D structure databases

ProteinModelPortaliE9PZM7
SMRiE9PZM7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 82RING-typeInterPro annotationAdd BLAST42

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili450 – 470Sequence analysisAdd BLAST21
Coiled coili1011 – 1031Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0825 Eukaryota
ENOG4111NG4 LUCA
GeneTreeiENSGT00530000063661
InParanoidiE9PZM7
OrthoDBiEOG091G05JH
TreeFamiTF332183

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

E9PZM7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKKSVYNQN VGDQECDDME GEENSNTADA SGLLYSEADR CPICLSCLLG
60 70 80 90 100
KEVGFPESCN HVFCMACILK WAEILASCPI DRKPFQAVFE LSAFEGCAKI
110 120 130 140 150
QVKRRLRETE DKENQRSFKK QLFYHESSKG NKRKRNTIRE DLLCERSDGL
160 170 180 190 200
KVLYRNISNK MDGKKNATVK TNKVQRSNQC TDSCIRNEMS SVFSCGSHSW
210 220 230 240 250
GPRTHRASCT ESIEVNEISA LIRQKRQELE LSWFPNTLPG NGRVGSVPWS
260 270 280 290 300
VETAFLSLAS SGLPRTVFPA STTSLEHFGT SHKGYALAHT QGGGEKKQTS
310 320 330 340 350
GTSNTRGSRR KPAATAPTRR STRNTRAETV SQSQKSPVSN YSECDAPGNS
360 370 380 390 400
NSSVSISPPA ESEKQTRQAP KRKSVRRGRK PPLLKKKLRR SVPPAEKSSS
410 420 430 440 450
DSVEEETVDS DTPPVLEKEQ QSCVESSSIC SVQTDEENHL HLESCSEQTE
460 470 480 490 500
ENEQANNHEI EEQTESLNSE SCTQDPPGLV GEDTGIEAKE FCADHDISPD
510 520 530 540 550
TSLRGRDSAE HQEQLSGSSE SEVQALVCTE SPPEGSPTCP PSDIEHQPVS
560 570 580 590 600
SPLGEVSDNT TPVVSDERAE ESLTVESTDL NDERTGESLT VESTDLNDSA
610 620 630 640 650
VNIEAFVESP KMESCEGETA QGLDRHCVPS SDSELPEHIQ TENTEIIPAC
660 670 680 690 700
EHIQTENTEI IPACEHIQTE NTEIIPVCGT LENENSDAVQ DCEDNLLKHN
710 720 730 740 750
LDNSQSDKFL EETTESLVEH PIHAELPHKE VDQSEKHFSE DNNESVPMEC
760 770 780 790 800
DSFCSDQNES EVESSANTDS KQLSENSVPH SSEDKLSSDP AVEKVETVAQ
810 820 830 840 850
PAESLVDKAP KPRTRRSRFH SPSTTWSPNK DAAQEKRRAQ SPSPKRETVV
860 870 880 890 900
ESQSSQSPSP KRESARGRRK SRSLSPKKDV ARERRQSRSP KRENAREAKR
910 920 930 940 950
SESGSPRRDT SRENQRSQSR VKDSSSREKS RSRSRERESD REAQRRERDR
960 970 980 990 1000
ERRARRWSRS RSRSRSPSRL RTKSKSSSFG RNERDNYSPR WKERWTNDGW
1010 1020 1030 1040 1050
RCPRGNDRYR RNDSEKQNEN TRNEKNDITA DSNDPSSTDK HRSDCPSWVT
1060 1070 1080 1090 1100
EKINSGPDPR TRNPEKLKDS HWEENRNENS GNSWTKNFGP GWMSSRGRGG
1110 1120 1130 1140 1150
RGKGAYRGNF ACNDQSENRW QSRTPLSGSD SFKSAEQQPS KRKSEQELSF
1160 1170 1180 1190 1200
GTAADRSGWT SASSWAVRKT LPADVQSYYS RRGRNSSGPQ SGWMRQEEET
1210 1220 1230 1240 1250
PEQDSNLKDQ TNQVDGSQLP VNMMQPHMSV MQPPVNAPHP PVGVFPYPVG
1260 1270 1280 1290 1300
LPAPMMNMQR NPFTMHPPMP LHLHTGVPLM QVAAPASIPQ GPPPPPPPPP
1310 1320 1330 1340 1350
SQQVSYVASQ PDGKQVQGLS SASHVSNNMN TQVLPAPSAA PANTGSVQGP
1360 1370 1380 1390 1400
SSGNTSSSSH VQASNAAVKL AESKKLQIQE KAAQEVKLAI KPFYQNKDIT
1410 1420 1430 1440 1450
KEEYKEIVRK AVDKVCHSKS GEVNSTKVAN LVKAYVDKYR YSRKKALEEP

GSTEKT
Length:1,456
Mass (Da):162,100
Last modified:April 5, 2011 - v1
Checksum:i78737750DD33C0D3
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3BQU5A0A2I3BQU5_MOUSE
SR-related CTD-associated factor 11
Scaf11
1,389Annotation score:
A0A2I3BRQ7A0A2I3BRQ7_MOUSE
SR-related CTD-associated factor 11
Scaf11
476Annotation score:
A0A2I3BQ68A0A2I3BQ68_MOUSE
SR-related CTD-associated factor 11
Scaf11
84Annotation score:
A0A2I3BQX1A0A2I3BQX1_MOUSE
SR-related CTD-associated factor 11
Scaf11
232Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133578 Genomic DNA No translation available.
AC158769 Genomic DNA No translation available.
RefSeqiNP_082424.2, NM_028148.2
UniGeneiMm.324474
Mm.472183

Genome annotation databases

EnsembliENSMUST00000047835; ENSMUSP00000044898; ENSMUSG00000033228
GeneIDi72193
KEGGimmu:72193
UCSCiuc007xkf.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133578 Genomic DNA No translation available.
AC158769 Genomic DNA No translation available.
RefSeqiNP_082424.2, NM_028148.2
UniGeneiMm.324474
Mm.472183

3D structure databases

ProteinModelPortaliE9PZM7
SMRiE9PZM7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000044898

PTM databases

iPTMnetiE9PZM7
PhosphoSitePlusiE9PZM7

Proteomic databases

MaxQBiE9PZM7
PaxDbiE9PZM7
PeptideAtlasiE9PZM7
PRIDEiE9PZM7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000047835; ENSMUSP00000044898; ENSMUSG00000033228
GeneIDi72193
KEGGimmu:72193
UCSCiuc007xkf.1 mouse

Organism-specific databases

CTDi9169
MGIiMGI:1919443 Scaf11

Phylogenomic databases

eggNOGiKOG0825 Eukaryota
ENOG4111NG4 LUCA
GeneTreeiENSGT00530000063661
InParanoidiE9PZM7
OrthoDBiEOG091G05JH
TreeFamiTF332183

Miscellaneous databases

ChiTaRSiScaf11 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000033228 Expressed in 286 organ(s), highest expression level in maxillary prominence
GenevisibleiE9PZM7 MM

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE9PZM7_MOUSE
AccessioniPrimary (citable) accession number: E9PZM7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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