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Entry version 77 (02 Jun 2021)
Sequence version 1 (05 Apr 2011)
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Protein
Submitted name:

LIM domain only 7

Gene

Lmo7

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-MMU-8951664, Neddylation
R-MMU-983168, Antigen processing: Ubiquitination & Proteasome degradation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
LIM domain only 7Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Lmo7Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 14

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1353586, Lmo7

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Keywords - PTMi

PhosphoproteinARBA annotation

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
E9PYF4

MaxQB - The MaxQuant DataBase

More...
MaxQBi
E9PYF4

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
E9PYF4

PeptideAtlas

More...
PeptideAtlasi
E9PYF4

PRoteomics IDEntifications database

More...
PRIDEi
E9PYF4

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
350979

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000033060, Expressed in secondary oocyte and 319 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
E9PYF4, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
E9PYF4, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
E9PYF4, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000097910

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
E9PYF4, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
E9PYF4

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini12 – 129Calponin-homology (CH)InterPro annotationAdd BLAST118
Domaini1036 – 1091PDZInterPro annotationAdd BLAST56
Domaini1628 – 1694LIM zinc-bindingInterPro annotationAdd BLAST67

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni262 – 291DisorderedSequence analysisAdd BLAST30
Regioni426 – 446DisorderedSequence analysisAdd BLAST21
Regioni701 – 904DisorderedSequence analysisAdd BLAST204
Regioni947 – 967DisorderedSequence analysisAdd BLAST21
Regioni974 – 993DisorderedSequence analysisAdd BLAST20
Regioni999 – 1022DisorderedSequence analysisAdd BLAST24
Regioni1152 – 1178DisorderedSequence analysisAdd BLAST27
Regioni1195 – 1235DisorderedSequence analysisAdd BLAST41
Regioni1248 – 1268DisorderedSequence analysisAdd BLAST21
Regioni1294 – 1488DisorderedSequence analysisAdd BLAST195
Regioni1533 – 1622DisorderedSequence analysisAdd BLAST90

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi276 – 291Basic and acidic residuesSequence analysisAdd BLAST16
Compositional biasi701 – 737Basic and acidic residuesSequence analysisAdd BLAST37
Compositional biasi773 – 797Basic and acidic residuesSequence analysisAdd BLAST25
Compositional biasi798 – 840Polar residuesSequence analysisAdd BLAST43
Compositional biasi856 – 904Polar residuesSequence analysisAdd BLAST49
Compositional biasi977 – 993Polar residuesSequence analysisAdd BLAST17
Compositional biasi999 – 1013Polar residuesSequence analysisAdd BLAST15
Compositional biasi1218 – 1235Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi1306 – 1360Basic and acidic residuesSequence analysisAdd BLAST55
Compositional biasi1369 – 1415Basic and acidic residuesSequence analysisAdd BLAST47
Compositional biasi1422 – 1438Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi1439 – 1477Polar residuesSequence analysisAdd BLAST39
Compositional biasi1537 – 1584Polar residuesSequence analysisAdd BLAST48
Compositional biasi1599 – 1622Polar residuesSequence analysisAdd BLAST24

Keywords - Domaini

LIM domainPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1704, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00950000183159

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_003242_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E9PYF4

Database of Orthologous Groups

More...
OrthoDBi
38375at2759

TreeFam database of animal gene trees

More...
TreeFami
TF332155

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00014, CH, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.418.10, 1 hit
2.30.42.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001715, CH-domain
IPR036872, CH_dom_sf
IPR031865, DUF4757
IPR029978, LMO-7
IPR001478, PDZ
IPR036034, PDZ_sf
IPR003096, SM22_calponin
IPR001781, Znf_LIM

The PANTHER Classification System

More...
PANTHERi
PTHR46767, PTHR46767, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00307, CH, 1 hit
PF15949, DUF4757, 2 hits
PF00412, LIM, 1 hit
PF00595, PDZ, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00888, SM22CALPONIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00033, CH, 1 hit
SM00132, LIM, 1 hit
SM00228, PDZ, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47576, SSF47576, 1 hit
SSF50156, SSF50156, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50021, CH, 1 hit
PS00478, LIM_DOMAIN_1, 1 hit
PS50023, LIM_DOMAIN_2, 1 hit
PS50106, PDZ, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

E9PYF4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEGMEDAEAD CSVAFAEAQR WVEAVTEKNF ETTDFRASLE NGVLLCDLIN
60 70 80 90 100
KLKPGVVKKI NRLSTPIAGL DNINVFLRAC EQIGLKEAQL FHPGDLQDLS
110 120 130 140 150
NRVTVKQEET DRRLKNVLIT LYWLGRKAQS NPYYNGPYLN LKAFETLLGQ
160 170 180 190 200
ALTKALEDSS CLKRSGRDSG YGDIWCPDRG EFPAPPGSHR REDSFESLDS
210 220 230 240 250
LGSRSLTSCS SDFTLRVGKE GCESDIDWEF TFKMQDYNKD DMSYRRISAI
260 270 280 290 300
EPKSALPFNR FLPNKSKQPS YVPAPLRKKR PDKHEDNRRS WASPVYTETD
310 320 330 340 350
GTFSSTQRRT WGPKMETWHT VQETSTSSWC VEEEEEKLTR MPNIVKDDLY
360 370 380 390 400
VRKLSPVMPS PGSSFDQFLP KCWTPEDMNW KKIKRETYKP WYKEFQGFSQ
410 420 430 440 450
FLLLQALQTY SDDILSSETS VKLDPTSGPR LITRRKNRSP APGYRAHDLE
460 470 480 490 500
LPALDPDLEN DDFFVRKTGA FHANPCVLRA FEDFRSFSEP DDAVERDIIL
510 520 530 540 550
QCREGELVLP DLEKDDMIVR RIPAQKKEVP LSGAPDRYQP VPFPEPWTLP
560 570 580 590 600
PEIQAKFLSV LERTRPPKEQ SSGCRVLVPS YRQKKDDMLA RKIQSWKLGT
610 620 630 640 650
AVPPISFKPG PCSEADLQKW EAIWEASRLR HRKRLMVERL FQKIYGENGS
660 670 680 690 700
KSMSDVSAED VQNLRQVRYE EMQKIKSQLK EQDQKWQDDL AKWKNRRKSY
710 720 730 740 750
TSDLQKKKEE REEIEKQALE KSDRSSKTFR EMLQDRESRG STVTSWRRTY
760 770 780 790 800
SSDDILDDGV LPPTVTLSET SYQSERLEDE ARAHPAEMPK EDSTTFANRE
810 820 830 840 850
DSVVAETQLA SHSPEEQRLA PSPSEEPRQA SGSSAEPHQA PLLSTEPRRT
860 870 880 890 900
PLPSEEPHQA SLSSTLQRPS SLSSQQSWST RAESTRISAS LPRSYQRTDT
910 920 930 940 950
ARLTSVVTAR PFGTSSRGIS SLPRSYTMDD GWKYNGDVEV VKREQLDLGR
960 970 980 990 1000
ATGPKPDSSH FISGSASEKE VIATEDVASL SSPTLPSSSL SHDRAVSSKA
1010 1020 1030 1040 1050
TFSSMSGLDS VSDSGEGRGS PLREVSRSLD QFSDMRVSIN QTPGNKPVFG
1060 1070 1080 1090 1100
FTIKWDISGI FVASVEQGSP AEFSQLQVDD EILAINNTKF SYKDTKKWEE
1110 1120 1130 1140 1150
VMANAQETGN LVMDVRRYGK SGSSETKWID TTSGIYNSDK SSSLSVTTDF
1160 1170 1180 1190 1200
SESLQSPYTE SKEVNGIHEE SNPFDSKASE SISLKNLKRR SQFFEQGSSD
1210 1220 1230 1240 1250
SVAPDLPVPT LSAPSRWAWD QEEERRRQER WQKEQDRLLQ EKYQREQEKL
1260 1270 1280 1290 1300
REEWQRAQQE AERENSKYLD EELMVLNSNS ISLTSREPVA ATWEATWSEG
1310 1320 1330 1340 1350
SKSLDSEGTR AGEEDRGQLE DDAVYEDQSQ KLQELEQEKK RKEQEAQEEE
1360 1370 1380 1390 1400
RRKQREAQAW AEAEAKAWAE AQARAEAEAK ARAEAQARAE AEAQKRAEAQ
1410 1420 1430 1440 1450
KLQAERERET SVKIYQYRRP IDSYDLPKRE DDTSGMLPTD RSKSRSTTEL
1460 1470 1480 1490 1500
NDPLIEKNGS SKYSERIGAT SFSHRSSKKD QAPSEAELER QQILQEMRKR
1510 1520 1530 1540 1550
TSLHNDNSWI RQRSASVNKE PICLPGIMRR GESLDNLDSQ RPGSWRQSPW
1560 1570 1580 1590 1600
HSQPAGVYAS SSVQDFSRPP PQLLSTSNRA YMRNPSSAVP PPAGSVKTSP
1610 1620 1630 1640 1650
GSPSPRSHSP SMSQSGSQLR NRSVSGKRVC SYCNNILGKG AAMIIETLGL
1660 1670 1680 1690
SYHLHCFKCV SCGCDLGGSS SGAEVRIRNH QLYCNDCYLR FKSGRPTAM
Length:1,699
Mass (Da):192,553
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFDB3BB890A4261D9
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6VG99F6VG99_MOUSE
LIM domain only 7
Lmo7
1,604Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q3UPW3Q3UPW3_MOUSE
LIM domain only 7
Lmo7
471Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6TFN2F6TFN2_MOUSE
LIM domain only 7
Lmo7
1,189Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A5F8MPW2A0A5F8MPW2_MOUSE
LIM domain only 7
Lmo7
188Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9PYI7E9PYI7_MOUSE
LIM domain only 7
Lmo7
1,453Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E0CZD8E0CZD8_MOUSE
LIM domain only 7
Lmo7
422Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

NCBI Reference Sequences

More...
RefSeqi
NP_963287.2, NM_201529.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000100337; ENSMUSP00000097910; ENSMUSG00000033060

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
380928

UCSC genome browser

More...
UCSCi
uc007uvx.2, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiNP_963287.2, NM_201529.2

3D structure databases

SMRiE9PYF4
ModBaseiSearch...

Protein-protein interaction databases

IntActiE9PYF4, 1 interactor
STRINGi10090.ENSMUSP00000097910

Proteomic databases

jPOSTiE9PYF4
MaxQBiE9PYF4
PaxDbiE9PYF4
PeptideAtlasiE9PYF4
PRIDEiE9PYF4
ProteomicsDBi350979

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
10122, 118 antibodies

Genome annotation databases

EnsembliENSMUST00000100337; ENSMUSP00000097910; ENSMUSG00000033060
GeneIDi380928
UCSCiuc007uvx.2, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
4008
MGIiMGI:1353586, Lmo7

Phylogenomic databases

eggNOGiKOG1704, Eukaryota
GeneTreeiENSGT00950000183159
HOGENOMiCLU_003242_0_0_1
InParanoidiE9PYF4
OrthoDBi38375at2759
TreeFamiTF332155

Enzyme and pathway databases

ReactomeiR-MMU-8951664, Neddylation
R-MMU-983168, Antigen processing: Ubiquitination & Proteasome degradation

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
380928, 0 hits in 36 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Lmo7, mouse
RNActiE9PYF4, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000033060, Expressed in secondary oocyte and 319 other tissues
ExpressionAtlasiE9PYF4, baseline and differential
GenevisibleiE9PYF4, MM

Family and domain databases

CDDicd00014, CH, 1 hit
Gene3Di1.10.418.10, 1 hit
2.30.42.10, 1 hit
InterProiView protein in InterPro
IPR001715, CH-domain
IPR036872, CH_dom_sf
IPR031865, DUF4757
IPR029978, LMO-7
IPR001478, PDZ
IPR036034, PDZ_sf
IPR003096, SM22_calponin
IPR001781, Znf_LIM
PANTHERiPTHR46767, PTHR46767, 1 hit
PfamiView protein in Pfam
PF00307, CH, 1 hit
PF15949, DUF4757, 2 hits
PF00412, LIM, 1 hit
PF00595, PDZ, 1 hit
PRINTSiPR00888, SM22CALPONIN
SMARTiView protein in SMART
SM00033, CH, 1 hit
SM00132, LIM, 1 hit
SM00228, PDZ, 1 hit
SUPFAMiSSF47576, SSF47576, 1 hit
SSF50156, SSF50156, 1 hit
PROSITEiView protein in PROSITE
PS50021, CH, 1 hit
PS00478, LIM_DOMAIN_1, 1 hit
PS50023, LIM_DOMAIN_2, 1 hit
PS50106, PDZ, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE9PYF4_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E9PYF4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 2, 2021
This is version 77 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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