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Entry version 67 (12 Aug 2020)
Sequence version 1 (05 Apr 2011)
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Protein
Submitted name:

Fibrocystin-L

Gene

Pkhd1l1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Fibrocystin-LImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pkhd1l1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 15

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2183153, Pkhd1l1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 20Sequence analysisAdd BLAST20
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500324537821 – 4249Sequence analysisAdd BLAST4229

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

GlycoproteinARBA annotation

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
E9PUU8

PRoteomics IDEntifications database

More...
PRIDEi
E9PUU8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000038725, Expressed in male associated reproductive structure (mouse) and 61 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
E9PUU8, baseline and differential

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
E9PUU8

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini337 – 492PA14InterPro annotationAdd BLAST156
Domaini2183 – 2303G8InterPro annotationAdd BLAST121
Domaini3035 – 3173G8InterPro annotationAdd BLAST139

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni4183 – 4208DisorderedSequence analysisAdd BLAST26

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157594

TreeFam database of animal gene trees

More...
TreeFami
TF329582

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.160.20.10, 1 hit
2.60.40.10, 14 hits
2.60.40.420, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039448, Beta_helix
IPR008972, Cupredoxin
IPR019316, G8_domain
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR037524, PA14/GLEYA
IPR011658, PA14_dom
IPR006626, PbH1
IPR012334, Pectin_lyas_fold
IPR011050, Pectin_lyase_fold/virulence
IPR029927, PKHDL1

The PANTHER Classification System

More...
PANTHERi
PTHR46769:SF2, PTHR46769:SF2, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13229, Beta_helix, 1 hit
PF10162, G8, 2 hits
PF07691, PA14, 1 hit
PF01833, TIG, 14 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01225, G8, 2 hits
SM00429, IPT, 10 hits
SM00758, PA14, 1 hit
SM00710, PbH1, 12 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49503, SSF49503, 1 hit
SSF51126, SSF51126, 1 hit
SSF81296, SSF81296, 14 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51484, G8, 2 hits
PS51820, PA14, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

E9PUU8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGHLWLSGTW FLFGLLWCAA DSHKGSSETI PKVTEVIPKY GSINGATRLT
60 70 80 90 100
IKGEGFSQAS QFNYGADNTE LGNHVQLVSS FQSITCDVEK DSSHSTQITC
110 120 130 140 150
YTRAMPEDTY SVRVSVDGVP VAENNTCKGV ASSWACSFST KSFRTPTIRS
160 170 180 190 200
ITPLSGTPGT LITIKGRLFT DVYGSNTALS SNGRNVRILR IYIGGMPCEL
210 220 230 240 250
LIPHSDDLYG LKLDHANGDT GSVTCKTTGT YIGHHNVSFI LDSDYGRSFP
260 270 280 290 300
EKMTYFVSSL NKISMFQTYP EVVMVSPSKG STEGGTLLTI HGHFFDQTDL
310 320 330 340 350
PVRVLVGGQA CAILNVTENT IYCKTPPKPH ILKATYPGGR GLKVEVWNNS
360 370 380 390 400
RPAHLEDILE YNEHTPGYMG ATWTDSASYV WPIEQDTFVA RISGFLVPPD
410 420 430 440 450
SDVYRFYIRG DDRYAIYFSQ TGRTEDKVRI AYYSGNANTY FSNSTQRSDE
460 470 480 490 500
IHLQKGKEYY IEILLQEYTL SAFVDVGLYQ YKNVFTEQQT GDALNEEQVI
510 520 530 540 550
KSQSTVVPEV QIITLENWET ADVTNEVQQV TVTSPCVGAN SCSLSQYRFI
560 570 580 590 600
YNMEKTVWLP ADASDFTLKS ALNDLWSIKP DSVQVTSKRD LQSYIYTITF
610 620 630 640 650
VSTRGDFDLL GYEVFEGSNV TLSITEQTKG KPNLETFTLN WDGIASKPLT
660 670 680 690 700
PESSEAEFQV AVEEMVSAKC PPEIAHLEEG FLVKYFRDYE TDFELEHINR
710 720 730 740 750
GQKTAETDAY CGRYSLKNPA VLFDSTDVKP NKSPYGDILL FPYNQLCLAY
760 770 780 790 800
KGSLANFIDL KFKYQDSGKI IRSADVQFEY NFASGNKWTY TCIDLLDFLQ
810 820 830 840 850
TKYAGTSFSL QRITLQKSSE FQSIYVDAVY IGQTPTVSVL DDMPKRRPPA
860 870 880 890 900
LANKGIFLKH FQVNRTKLNG SAMTIQYSVT ITSYNCSHNI PMMAVSFGQI
910 920 930 940 950
ITNETKNELV YRGNNWPGES KIRIQKIQEA SPPISGSFDV QAYGHTLKGI
960 970 980 990 1000
PAAVPAADLQ FALQSLEEIE QVSVNREGTC AGYSWSIRWT SPRGKQPLLQ
1010 1020 1030 1040 1050
INDSNIIGEK ANVTVTTIKE GGLFRQRIPG DMLRTLNQQP QVEVYVNGIP
1060 1070 1080 1090 1100
AKCSGDCGFT WDAMITPLIL TTTPSEGSYA ESTILTIAGS GFSPTSAVSV
1110 1120 1130 1140 1150
SVGSTRCSLL SVEENEIKCQ ILNGSAGHVP VAVSIADVGL AQNLEGEGSH
1160 1170 1180 1190 1200
FIYRSQISHV WPDSGSLAGG TLLTISGFGF SENSTVLVGN ETCNVIEGDL
1210 1220 1230 1240 1250
NRITCRTSKR IEGTVDISVI TNGIQVTAKD SFSYSCLQTP VVTDFSPKER
1260 1270 1280 1290 1300
TVLGKVNLTI KGYNFGNELA QNTVYVGRKH CQVLHSNFTD ITCLLPTLPP
1310 1320 1330 1340 1350
GKHDIYVKVR NWGLASTRNK LNASILYILE VIHMFPQRGS LYGGTEITIM
1360 1370 1380 1390 1400
GFGFSTIPTE NSVLLGSFPC DITSSSENVI KCTLHSTGTV FRITNNGSHL
1410 1420 1430 1440 1450
VHGLGYAWSP SVLNVTVGDT VVWSWQAHPF LRGIGYRIFS VSSPGSVTYD
1460 1470 1480 1490 1500
DKGFTNGRQK SASGSFSYQF TSPGIYYYSS GYVDEAHSIS LQGVINVFPA
1510 1520 1530 1540 1550
EARHIPLYLF VGNIEATYVP AGPAHLQLAS TAAGCLATEP LCGLNDTRVK
1560 1570 1580 1590 1600
HSNKLFFELS NCISPSIINI TPSTGTANEL ITIIGHGFSS LPCANKVTIG
1610 1620 1630 1640 1650
SYPCVVEESS ENSIICHIDP QNSMNVGIRE IVTLIVYNLG TAINTLTKAF
1660 1670 1680 1690 1700
DRRFVLLPNI DMVMPKAGST TGMTRVTIQG SGFMSSPEGV EVFMGDFPCK
1710 1720 1730 1740 1750
VLSVTYTAIE CETSPAPQQL VLVDILIHGV PAQCQSNCSF SYLENIAPYV
1760 1770 1780 1790 1800
TGIFPNSIQG YGNVLIKGER FGTVLEEISI FIGSQQFRVI DVNENNITVL
1810 1820 1830 1840 1850
MTPLEAGLHS LSVVVGSKGL ALGNLTISSP AVASVSPTSG SIAGGTTLMI
1860 1870 1880 1890 1900
TGNGFSPGNT TVTVGDQPCQ ITFISSSEVY CSTPAGRAGT ANLKISVNAI
1910 1920 1930 1940 1950
IYPPLSFTYA MEDTPFLKRI IPNRGLPGTE VEITGSNLGF AISDVSVMIK
1960 1970 1980 1990 2000
ESVCNVTTVN DTVLQCTVGE HAGGIFPVTM LHKTKGSAVS SVAFEYPLSI
2010 2020 2030 2040 2050
QNIYPTQGSF GGGQTLTVTG MGFDPWNSTI LVCNSECAVD KLRSNSTTLF
2060 2070 2080 2090 2100
CVIPPNNGKG HDQVCGVSVV NGKDSSHSTK LFTYTLSLTP LITEISPRRG
2110 2120 2130 2140 2150
STAGGTRLTV TGSGFSENTQ GVQVFVGNSK CDIQYSNKTH IVCMTSVHVP
2160 2170 2180 2190 2200
SGWVPVHVNI KNIGLAKLEN ADFLYADVWS ANSSWGGSPP PEEGSLAVIT
2210 2220 2230 2240 2250
KGQIILLDQS TPILKMLLIQ GGTLIFDEAN IELQAENILI TDGGVLQIGT
2260 2270 2280 2290 2300
EASPFQHRAV ITLHGHLRSP ELPVYGAKTL GVREGTLDLH GLPIPVVWTR
2310 2320 2330 2340 2350
LTHTANAGEW TLTVQEAVTW KAGDNIVIAS TGHRHSQAEN EKRTIASVSA
2360 2370 2380 2390 2400
DGMHITLTKP LNYTHLGITT TLPDGTVFEA RAEVGILTRN ILIRGSDNVE
2410 2420 2430 2440 2450
WNDKIPSCPD GFDTGEFATQ TCLQGKFGEE MGSDQFGGCI MLHAPLPGAD
2460 2470 2480 2490 2500
MVTGRIEYVE VFHAGQSFRL GRYPIHWHLL GDLQFKSYVK GCAIHQSYNR
2510 2520 2530 2540 2550
AITIHNTHHL LVERNIIYDI KGGAFFIEDG IEHGNILQYN LAVFVQQSTS
2560 2570 2580 2590 2600
LLNDDVTPAA FWVTNPNNTI RHNAAAGGTH FGFWYRMNDH PDGPSFDRNI
2610 2620 2630 2640 2650
CQKRIPLGEF FNNTVHSQGW FGLWIFEEYF PMQTGSCTST VPVPAIFNSL
2660 2670 2680 2690 2700
TVWNCQKGAE WVNGGALQFH NFVMVNNNEA GIETKRILAP YVGGWGESNG
2710 2720 2730 2740 2750
AVIKNAKIVG HLDELGMGPT FCTSKGLVLP FSQGLTVSSV HFMNFDRHAC
2760 2770 2780 2790 2800
VALGVTSITG VCNDRCGGWS AKFVGIRYFH APNKGGFRWE HEAVLIDVDG
2810 2820 2830 2840 2850
SLTGHRGHTV VPHSSLLDPS HCTQEPAWSI GFPGSICDAS VSFHRLAFNK
2860 2870 2880 2890 2900
PSPVSLLEKD VVLSDSFGTS IVPFQKKRLT HMSGWMALIP NANHINWYFK
2910 2920 2930 2940 2950
GVEHLTNISY TSTFYGFKEE DYVIISHNFT QNPDMFNVVD MRNGSANPLN
2960 2970 2980 2990 3000
WNSSKNGDWH LEANTSTLYY LVSGRSDLPQ SQPISGTLDP GVKDVIINFQ
3010 3020 3030 3040 3050
AYCCVLQDCF PVHPPSRKPI PRKRPAAYNL WSNESFWQSS PENNYTVPRP
3060 3070 3080 3090 3100
GANVIIPEGT WIVADVDIPP VERLIIWGVL EMEDKSEIGV AGPTYRRVVL
3110 3120 3130 3140 3150
NATYISVQGG RLIGGWEDNP FKGELQIVLR GNHSTPEWAF PDGPNQGAKV
3160 3170 3180 3190 3200
LGVFGELDLH GLPHSVYKTK LLETAEAGSK ILSLVDAVDW QEGEDVVITT
3210 3220 3230 3240 3250
TSYDLHQTEI RRIAKILHGH KILILNDSLS YTHLAERQWI SGTAQSYTLS
3260 3270 3280 3290 3300
ADVGILSRNI KIVGDDYSVL SKDSFGARIL VGSFTGNMMT FKGNARISNV
3310 3320 3330 3340 3350
EFHHSGQEGY RDSTDPRYAV TFLNLGQIQD HGLSYVRGCA FHHVFSPAIG
3360 3370 3380 3390 3400
VFGTDGVDID DNIIYFTVGE GIRIWGDANR VRGNLVTLSV WPGTYQNRKD
3410 3420 3430 3440 3450
LSSTLWHAAI EINRGTNTVL QNNVVAGFGR VGYRIDGEPC SSQANSMENW
3460 3470 3480 3490 3500
FNNEAHGGLY GIYMNQDGLP GCSLIQGFTI WTCWDYGIYF QTTESVHIYN
3510 3520 3530 3540 3550
VTLVNNGMSI FSMVYMPPSV SHKISSKTVK IKNSLIVGSS PEFNCSDVLT
3560 3570 3580 3590 3600
NDSPDVELTS AHRSSRPPSG GRSGICWPTF ASAHNMAPRK PHAGIMSYNA
3610 3620 3630 3640 3650
ISGLLHIVNS TFVGFKDVCS GETNVIFITN PLNEDLQHPI HVKNVQLIDT
3660 3670 3680 3690 3700
IEQSKVFIHR PDISKVNPSD CVDMVCDAKR KSFLRDLDGS FLGNSGSVIP
3710 3720 3730 3740 3750
QAEYEWDGNS QLGIGDYRIP KAMLTYLNGS RIPVTEKAPH KGIIRDATCK
3760 3770 3780 3790 3800
YIPEWQSYQC SGMEYAMMVL ESLDSDTETR RLSPVAIMSN GYVDLINGPQ
3810 3820 3830 3840 3850
DHGWCAGYTC QRRLSLFHGI VALNKKYEVY FTGTSPQNLR LMLLNVEHNK
3860 3870 3880 3890 3900
AVLVGIFFST LQRLDVYVNN SLVCPKNTAW NAQKKHCELE RHLSTEQFLP
3910 3920 3930 3940 3950
NLGSTVPGEN YFDRTYQMLY LFLKGTTPVE VHTATVIFVS FHLPVMTADE
3960 3970 3980 3990 4000
FFSSHNLVRN LALFLKIPSD KIRVSRIIGA SLRKKRSTGH IMEFEIGAAP
4010 4020 4030 4040 4050
TQFLSNSTTG QMQLSELQEI TDSLGQAVVL GKISTILGFN ISSMSITSPI
4060 4070 4080 4090 4100
PQPTDSGWIK VTAQPVERSA FPVHYLALVS SLSVVAQPVA AQPGQPFPQQ
4110 4120 4130 4140 4150
PSVKAVDPEG NCVSVGITSL TLKAILKDSN NNQVGGLSGN TTIPFSTCWA
4160 4170 4180 4190 4200
NYTDLTPHRT GKNYKIEFVL DNTVRVDSRP FSLSAQSVPG GSGSSPGSGS
4210 4220 4230 4240
SSSGHSKASS VGTPVQTLAV ITACLVGRLL LLEVFMAAVF ILNTTVGKC
Length:4,249
Mass (Da):464,761
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i50259914C32B1735
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q80ZA4PKHL1_MOUSE
Fibrocystin-L
Pkhd1l1
4,249Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F8WH29F8WH29_MOUSE
Fibrocystin-L
Pkhd1l1
4,247Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC127312 Genomic DNA No translation available.
AC128736 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000166957; ENSMUSP00000129522; ENSMUSG00000038725

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC127312 Genomic DNA No translation available.
AC128736 Genomic DNA No translation available.

3D structure databases

SMRiE9PUU8
ModBaseiSearch...

Proteomic databases

MaxQBiE9PUU8
PRIDEiE9PUU8

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
26574, 19 antibodies

Genome annotation databases

EnsembliENSMUST00000166957; ENSMUSP00000129522; ENSMUSG00000038725

Organism-specific databases

MGIiMGI:2183153, Pkhd1l1

Phylogenomic databases

GeneTreeiENSGT00940000157594
TreeFamiTF329582

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Pkhd1l1, mouse

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000038725, Expressed in male associated reproductive structure (mouse) and 61 other tissues
ExpressionAtlasiE9PUU8, baseline and differential

Family and domain databases

Gene3Di2.160.20.10, 1 hit
2.60.40.10, 14 hits
2.60.40.420, 1 hit
InterProiView protein in InterPro
IPR039448, Beta_helix
IPR008972, Cupredoxin
IPR019316, G8_domain
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR037524, PA14/GLEYA
IPR011658, PA14_dom
IPR006626, PbH1
IPR012334, Pectin_lyas_fold
IPR011050, Pectin_lyase_fold/virulence
IPR029927, PKHDL1
PANTHERiPTHR46769:SF2, PTHR46769:SF2, 1 hit
PfamiView protein in Pfam
PF13229, Beta_helix, 1 hit
PF10162, G8, 2 hits
PF07691, PA14, 1 hit
PF01833, TIG, 14 hits
SMARTiView protein in SMART
SM01225, G8, 2 hits
SM00429, IPT, 10 hits
SM00758, PA14, 1 hit
SM00710, PbH1, 12 hits
SUPFAMiSSF49503, SSF49503, 1 hit
SSF51126, SSF51126, 1 hit
SSF81296, SSF81296, 14 hits
PROSITEiView protein in PROSITE
PS51484, G8, 2 hits
PS51820, PA14, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE9PUU8_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E9PUU8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: August 12, 2020
This is version 67 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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