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Protein
Submitted name:

LIM domain only protein 7

Gene

LMO7

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
LIM domain only protein 7Imported
Gene namesi
Name:LMO7Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 13

Organism-specific databases

EuPathDBiHostDB:ENSG00000136153.19
HGNCiHGNC:6646 LMO7

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000136153

PTM / Processingi

Proteomic databases

PeptideAtlasiE9PK58
PRIDEiE9PK58

Expressioni

Gene expression databases

BgeeiENSG00000136153 Expressed in 154 organ(s), highest expression level in lower esophagus mucosa
ExpressionAtlasiE9PK58 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliE9PK58
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 165DUF4757InterPro annotationAdd BLAST157

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili102 – 157Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063559

Family and domain databases

InterProiView protein in InterPro
IPR031865 DUF4757
IPR029978 LMO-7
PANTHERiPTHR15551:SF4 PTHR15551:SF4, 2 hits
PfamiView protein in Pfam
PF15949 DUF4757, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 17 potential isoforms that are computationally mapped.Show allAlign All

E9PK58-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQDYNKDDMS YRRISAVEPK TALPFNRFLP NKSRQPSYVP APLRKKKPDK
60 70 80 90 100
HEDNRRSWAS PVYTEADGTF SRLFQKIYGE NGSKSMSDVS AEDVQNLRQL
110 120 130 140 150
RYEEMQKIKS QLKEQDQKWQ DDLAKWKDRR KSYTSDLQKK KEEREEIEKQ
160
ALEKSKRSSK TFKEM
Length:165
Mass (Da):19,748
Last modified:October 5, 2016 - v8
Checksum:iB1AB8B7EB562A847
GO

Computationally mapped potential isoform sequencesi

There are 17 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8WWI1LMO7_HUMAN
LIM domain only protein 7
LMO7 FBX20, FBXO20, KIAA0858
1,683Annotation score:
F8WD26F8WD26_HUMAN
LIM domain only protein 7
LMO7
1,631Annotation score:
E9PMS6E9PMS6_HUMAN
LIM domain only protein 7
LMO7
1,275Annotation score:
E9PMT2E9PMT2_HUMAN
LIM domain only protein 7
LMO7
1,398Annotation score:
J3KP06J3KP06_HUMAN
LIM domain only protein 7
LMO7
1,668Annotation score:
A0A0A0MTE2A0A0A0MTE2_HUMAN
LIM domain only protein 7
LMO7
1,385Annotation score:
E9PMP7E9PMP7_HUMAN
LIM domain only protein 7
LMO7
1,045Annotation score:
H0YDG6H0YDG6_HUMAN
LIM domain only protein 7
LMO7
305Annotation score:
H0Y424H0Y424_HUMAN
LIM domain only protein 7
LMO7
1,055Annotation score:
U3KQE6U3KQE6_HUMAN
LIM domain only protein 7
LMO7
99Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei165Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL137121 Genomic DNA No translation available.
AL137244 Genomic DNA No translation available.
AL137782 Genomic DNA No translation available.
AL359392 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000489941; ENSP00000431636; ENSG00000136153
UCSCiuc058xnj.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL137121 Genomic DNA No translation available.
AL137244 Genomic DNA No translation available.
AL137782 Genomic DNA No translation available.
AL359392 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliE9PK58
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiE9PK58
PRIDEiE9PK58

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000489941; ENSP00000431636; ENSG00000136153
UCSCiuc058xnj.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000136153.19
HGNCiHGNC:6646 LMO7
OpenTargetsiENSG00000136153
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00530000063559

Miscellaneous databases

ChiTaRSiLMO7 human

Gene expression databases

BgeeiENSG00000136153 Expressed in 154 organ(s), highest expression level in lower esophagus mucosa
ExpressionAtlasiE9PK58 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR031865 DUF4757
IPR029978 LMO-7
PANTHERiPTHR15551:SF4 PTHR15551:SF4, 2 hits
PfamiView protein in Pfam
PF15949 DUF4757, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE9PK58_HUMAN
AccessioniPrimary (citable) accession number: E9PK58
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: October 5, 2016
Last modified: September 12, 2018
This is version 57 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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