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Protein
Submitted name:

Cleavage and polyadenylation-specificity factor subunit 1

Gene

CPSF1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cleavage and polyadenylation-specificity factor subunit 1Imported
Gene namesi
Name:CPSF1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 8

Organism-specific databases

EuPathDBiHostDB:ENSG00000071894.14
HGNCiHGNC:2324 CPSF1

PTM / Processingi

Proteomic databases

PeptideAtlasiE9PIM1
PRIDEiE9PIM1

Expressioni

Gene expression databases

BgeeiENSG00000071894 Expressed in 101 organ(s), highest expression level in right testis
ExpressionAtlasiE9PIM1 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliE9PIM1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1896 Eukaryota
COG5161 LUCA
GeneTreeiENSGT00550000075040

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

E9PIM1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MYAVYKQAHP PTGLEFSMYC NFFNNSERNL VVAGTSQLYV YRLNRDAEAL
60 70 80 90 100
TKNDRSTEGK AHREKLELAA SFSFFGNVMS MASVQLAGAK RDALLLSFKD
110 120 130 140
AKLSVVEYDP GTHDLKTLSL HYFEEPELRD RAAGVGACDL HEDSVSAQ
Length:148
Mass (Da):16,504
Last modified:October 29, 2014 - v3
Checksum:iA0FCBB4E89F13D96
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q10570CPSF1_HUMAN
Cleavage and polyadenylation specif...
CPSF1 CPSF160
1,443Annotation score:
A0A087WTV4A0A087WTV4_HUMAN
Cleavage and polyadenylation-specif...
CPSF1
169Annotation score:
A0A087X101A0A087X101_HUMAN
Cleavage and polyadenylation-specif...
CPSF1
204Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC233992 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000531042; ENSP00000435761; ENSG00000071894
UCSCiuc064rlw.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC233992 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliE9PIM1
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiE9PIM1
PRIDEiE9PIM1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000531042; ENSP00000435761; ENSG00000071894
UCSCiuc064rlw.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000071894.14
HGNCiHGNC:2324 CPSF1
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1896 Eukaryota
COG5161 LUCA
GeneTreeiENSGT00550000075040

Miscellaneous databases

ChiTaRSiCPSF1 human

Gene expression databases

BgeeiENSG00000071894 Expressed in 101 organ(s), highest expression level in right testis
ExpressionAtlasiE9PIM1 baseline and differential

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
ProtoNetiSearch...

Entry informationi

Entry nameiE9PIM1_HUMAN
AccessioniPrimary (citable) accession number: E9PIM1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: October 29, 2014
Last modified: September 12, 2018
This is version 41 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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