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Protein

Bacteriocin glycocin F

Gene

gccF

Organism
Lactobacillus plantarum
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Has antibacterial activity against L.plantarum ATCC 8014. In purified form, the activity is bacteriostatic (IC50=2 nM) rather than bactericidal.1 Publication

GO - Biological processi

  • cytolysis Source: UniProtKB-KW
  • defense response to Gram-positive bacterium Source: UniProtKB

Keywordsi

Molecular functionAntibiotic, Antimicrobial, Bacteriocin

Names & Taxonomyi

Protein namesi
Recommended name:
Bacteriocin glycocin F1 Publication
Short name:
GccF1 Publication
Gene namesi
Name:gccFImported
OrganismiLactobacillus plantarum
Taxonomic identifieri1590 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 211 PublicationAdd BLAST21
ChainiPRO_500070623122 – 64Bacteriocin glycocin F1 PublicationAdd BLAST43

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi26 ↔ 492 Publications
Disulfide bondi33 ↔ 422 Publications
Glycosylationi39O-linked (GlcNAc) serine2 Publications1
Glycosylationi64S-linked (GlcNAc) cysteine2 Publications1

Keywords - PTMi

Disulfide bond, Glycoprotein

PTM databases

iPTMnetiE9K9Z1

Structurei

Secondary structure

164
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SMRiE9K9Z1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E9K9Z1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKLVKTLTI SEISKAQNNG GKPAWCWYTL AMCGAGYDSG TCDYMYSHCF
60
GIKHHSSGSS SYHC
Length:64
Mass (Da):7,002
Last modified:April 5, 2011 - v1
Checksum:iC294FC72D49FB316
GO

Mass spectrometryi

Molecular mass is 5199.0488 Da from positions 22 - 64. Determined by ESI. Dual Electrospray/MALDI source.1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU552553 Genomic DNA Translation: ADV57366.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU552553 Genomic DNA Translation: ADV57366.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KUYNMR-A22-64[»]
SMRiE9K9Z1
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiE9K9Z1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiGCCF_LACPN
AccessioniPrimary (citable) accession number: E9K9Z1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: April 5, 2011
Last modified: October 25, 2017
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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