Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 51 (16 Oct 2019)
Sequence version 1 (05 Apr 2011)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

ABC transporter

Gene

DAPPUDRAFT_347281

Organism
Daphnia pulex (Water flea)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi668 – 675ATPPROSITE-ProRule annotation8
Nucleotide bindingi1342 – 1349ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
ABC transporterImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:DAPPUDRAFT_347281Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDaphnia pulex (Water flea)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6669 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaCrustaceaBranchiopodaDiplostracaCladoceraAnomopodaDaphniidaeDaphnia
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000305 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei42 – 60HelicalSequence analysisAdd BLAST19
Transmembranei81 – 100HelicalSequence analysisAdd BLAST20
Transmembranei112 – 133HelicalSequence analysisAdd BLAST22
Transmembranei145 – 163HelicalSequence analysisAdd BLAST19
Transmembranei183 – 199HelicalSequence analysisAdd BLAST17
Transmembranei328 – 347HelicalSequence analysisAdd BLAST20
Transmembranei359 – 380HelicalSequence analysisAdd BLAST22
Transmembranei435 – 454HelicalSequence analysisAdd BLAST20
Transmembranei460 – 481HelicalSequence analysisAdd BLAST22
Transmembranei537 – 563HelicalSequence analysisAdd BLAST27
Transmembranei583 – 606HelicalSequence analysisAdd BLAST24
Transmembranei971 – 994HelicalSequence analysisAdd BLAST24
Transmembranei1041 – 1061HelicalSequence analysisAdd BLAST21
Transmembranei1109 – 1142HelicalSequence analysisAdd BLAST34
Transmembranei1212 – 1232HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
6669.EFX72783

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini321 – 603ABC transmembrane type-1InterPro annotationAdd BLAST283
Domaini634 – 858ABC transporterInterPro annotationAdd BLAST225
Domaini985 – 1271ABC transmembrane type-1InterPro annotationAdd BLAST287
Domaini1310 – 1542ABC transporterInterPro annotationAdd BLAST233

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni885 – 955DisorderedSequence analysisAdd BLAST71

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi896 – 931PolarSequence analysisAdd BLAST36

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0054 Eukaryota
COG1132 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E9H667

KEGG Orthology (KO)

More...
KOi
K05665

Database of Orthologous Groups

More...
OrthoDBi
138195at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.20.1560.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR030247 ABCC2
IPR005292 Multidrug-R_assoc
IPR027417 P-loop_NTPase

The PANTHER Classification System

More...
PANTHERi
PTHR24223:SF176 PTHR24223:SF176, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00664 ABC_membrane, 2 hits
PF00005 ABC_tran, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00382 AAA, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540 SSF52540, 2 hits
SSF90123 SSF90123, 2 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00957 MRP_assoc_pro, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50929 ABC_TM1F, 2 hits
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

E9H667-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDNQTDQTS PLDSFCGSTF WDLEQTWNTN NPSFTECFHQ TVLYWIPCGF
60 70 80 90 100
IWLLAPYETY QILYSNARYI PWSIFNISKM IINLLLIILS IISIIYAVIQ
110 120 130 140 150
SNNDVQIYTY DVYYVTPAIL AATFVLTLGL MLAEKRRGIR SSGPLFMFWF
160 170 180 190 200
LLTLCGGFTY ADRIKSIVDG MDSLETYPFV WEMVYYPFVV SMLFINCFAD
210 220 230 240 250
KEPLYMEGEG KSENPCPEEG SSFLNVITYS WLDTLVWKGY RKPLETGDLW
260 270 280 290 300
DLNSRDKSKS VVPRFEKHWL KSLSKQAKKP SEPKATYGAE NGGVSFKPST
310 320 330 340 350
SSKKIVSILP ALCKTFAPEF LLGALLKLIQ DLLAFVSPQI LSLLIGFVED
360 370 380 390 400
STQESWKGYL YAAILTITAM TQTLILGQYF QRMFIIGMQI RTSIVSSIYR
410 420 430 440 450
KAIKISNSAR KESTVGEIVN LMSVDAQRLM DLTTYLNMLW SAPLQIALAI
460 470 480 490 500
YFLYQILGPS VFAGLGVMIL LIPINGVLAN ATKKLQIQQM KYKDKRVKMM
510 520 530 540 550
SEILSGIKVL KLYAWEPSFQ AQVEDIRNKE IKVLKQAAYL SAGTSFLWTC
560 570 580 590 600
APFLVTLATF AVYVTTDPSH ILDAKKAFVS LTLFNLLRFP MSMFPMLVVS
610 620 630 640 650
FVQASVSIKR LNKFMNADEL DPESVSHETT ASAINIEKGS FAWSQGEQPI
660 670 680 690 700
LKDINIEIKP GKLVAVVGQV GAGKSSLISA ILGEMEKLGG KANTNGKIAY
710 720 730 740 750
IPQQAWIQNC SLRNNIMFGK TYNESVYNKV INACALKPDL AMLPGGDSTE
760 770 780 790 800
IGEKGINLSG GQKQRVSLAR SVYSDMDVYL LDDPLSAVDS HVGKHIFDEV
810 820 830 840 850
IGPKGLLKAK TRLLVTHGIT FLPQVDQIIV LKNGEVSEVG SYKELLAQKG
860 870 880 890 900
AFAEFLLQHL EEEGADEDDI PDELAEIKQE LENTMGKEEF ARQISRQRAT
910 920 930 940 950
SETQSQNSEN AESKPMIASP DRSLSSGGSL RRRSSAKDRK SVDGGAPAAK
960 970 980 990 1000
PNNTKLIEAE KTETGKVNSQ VYVHYLQSVG GWLSFITLIL YMIYQGFAVY
1010 1020 1030 1040 1050
SNIWLAKWSE AGNTTVGNHT VEQQRDIYLG VYGALGLGQS IFLLIGTITI
1060 1070 1080 1090 1100
SLGCLQASAI LHEGMIARTF RLPMSHFDTT PIGRIVNRFA KDVDVVDNLI
1110 1120 1130 1140 1150
PSSIRTALLC FLSVISTILV IGLGTPIFFA VAVPIGVLYY WIQNVYVATS
1160 1170 1180 1190 1200
RQLKRLESVS RSPIYSHFGE TLTGATVIRA YGQEQRFIKE SESRVDLNQI
1210 1220 1230 1240 1250
CYYPSIVANR WLSIRLETIG NLVVLFASLF AVIEREKGTM DPGYVGLSIT
1260 1270 1280 1290 1300
YALSITQTLN WFMRMTSEVE TNIVAVERIK EYSEAVQEAS WDHGKREPPN
1310 1320 1330 1340 1350
SWPDKGKVSF EKYEVRYREG LDLVIKGITC DIQGGEKVGI VGRTGAGKSS
1360 1370 1380 1390 1400
LTLALFRIIE AASGKITIDG LDIADLGLHA LRSRLTIIPQ DPVLFSGTLR
1410 1420 1430 1440 1450
MNLDPFNSYS DDDIWTALEH AHLKTFVKSL PAGLEHEASE GGENLSVGQR
1460 1470 1480 1490 1500
QLICLARALL RKTKVLILDE ATAAVDLETD DLIQATIRKE FKEGTVITIA
1510 1520 1530 1540
HRLNTILDSN RVMVLDKGEI KEYAPPNELL ENKESIFYGM ARDAGLV
Length:1,547
Mass (Da):172,245
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFCA204C87B27A651
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GL732596 Genomic DNA Translation: EFX72783.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
EFX72783; EFX72783; DAPPUDRAFT_347281

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
dpx:DAPPUDRAFT_347281

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL732596 Genomic DNA Translation: EFX72783.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi6669.EFX72783

Genome annotation databases

EnsemblMetazoaiEFX72783; EFX72783; DAPPUDRAFT_347281
KEGGidpx:DAPPUDRAFT_347281

Phylogenomic databases

eggNOGiKOG0054 Eukaryota
COG1132 LUCA
InParanoidiE9H667
KOiK05665
OrthoDBi138195at2759

Family and domain databases

Gene3Di1.20.1560.10, 2 hits
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR030247 ABCC2
IPR005292 Multidrug-R_assoc
IPR027417 P-loop_NTPase
PANTHERiPTHR24223:SF176 PTHR24223:SF176, 1 hit
PfamiView protein in Pfam
PF00664 ABC_membrane, 2 hits
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
SSF90123 SSF90123, 2 hits
TIGRFAMsiTIGR00957 MRP_assoc_pro, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 2 hits
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE9H667_DAPPU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E9H667
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2019
This is version 51 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again