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Entry version 38 (07 Oct 2020)
Sequence version 1 (05 Apr 2011)
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Protein
Submitted name:

Uncharacterized protein

Gene

Isop_0312

Organism
Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Protein family/group databases

Transport Classification Database

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TCDBi
1.B.14.17.3, the outer membrane receptor (omr) family

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Isop_0312Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiIsosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri575540 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaIsosphaeralesIsosphaeraceaeIsosphaera
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008631 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
575540.Isop_0312

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini78 – 137PSCyt1InterPro annotationAdd BLAST60
Domaini199 – 405PSCyt2InterPro annotationAdd BLAST207
Domaini777 – 1033PSD1InterPro annotationAdd BLAST257

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG2010, Bacteria

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
CLU_005632_1_0_0

Identification of Orthologs from Complete Genome Data

More...
OMAi
HGGWNSD

Database of Orthologous Groups

More...
OrthoDBi
520387at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011429, Cyt_c_Planctomycete-type
IPR011444, DUF1549
IPR022655, DUF1553

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07635, PSCyt1, 1 hit
PF07583, PSCyt2, 1 hit
PF07587, PSD1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

E8QX74-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMTKMIMTRS VSCRRHVVGW IERWGSIALI GMIGWLGGPV ERALAGGVRV
60 70 80 90 100
GETSVATLHG IDSVDFERQV LPILTTRCFE CHDARKQTAG LRLDARSRAF
110 120 130 140 150
AGGESGLASI VPGQPDESEL ILRVESQEEF ERMPPKGPPL TPEEIGVLRL
160 170 180 190 200
WIEQGATWPD ALANDHDPAR DHWAFRPPNR PALPDLKGHH RLAGWVRNPI
210 220 230 240 250
DHFVAARLAA EGLEPSPAAD RLTLARRIAL DLTGLPPSIE QADALAHDPD
260 270 280 290 300
PDDQALARYI ESHLRSPHYG EHWARWWLDA ARYADSDGFE KDKPRSVWNY
310 320 330 340 350
RDYVINAFNA NLPYDRFVIE QLAGDWLPNA TPAQKIATGF LRNSMINEEG
360 370 380 390 400
GVDPEQFRME AMFDRMDAVG KSLLGLTIQC AQCHDHKYDP LKQSEYYQMF
410 420 430 440 450
AFLNNDHEAS IEVFTPEQES RREEILSRVR AIEAELKASA PDWRERLAAW
460 470 480 490 500
EAALLDPSQA FSWSVIRPEA EANSTGGQKY LLQEDGSFLC QGYAPTKHTV
510 520 530 540 550
MLTAQVDRPV LTAFRLEALP HPDLPLNGPG RSIKGTFALT EFKAEVTPLG
560 570 580 590 600
VPNAKPTPVE FVRATATVNP PERELDPIFF DKTDRRRVTG PVEFAIDGRD
610 620 630 640 650
QTAWSDNLGP GRRNRPVEAV FLAKRPLVDP GGRGFLVTIR LVQNHGGWNS
660 670 680 690 700
DDNQNHNLGR FRLSVTDETT AQADPVPLDV RASLKIAPEQ RTPDDLERIF
710 720 730 740 750
AHWRTTVPQW HEANQRIDAL LAELPEGTPQ LVLQARAQPR TTQILKRGDF
760 770 780 790 800
LKPGDPVQPG TPAFLHPLET TEGTPLNRLT FARWVVDRRS PTTARAIVNR
810 820 830 840 850
VWQRLFGVGL VETPEDLGVQ SPPPSHPELL DWLAVELMES GWDLNHLQRL
860 870 880 890 900
ILTSATYRQS SRLTPQLAER DPNNRLLARM PRLRLEAEVI RDAALAASGL
910 920 930 940 950
LNRRVGGPSV FPPLPEFLLQ PPVSYGPKSW PVSPPEEQRR RSLYIFRYRS
960 970 980 990 1000
LPYPALEVFD APPGEVACVR RSRSNTPLQA LTSLNEPVFV EAARSLALAT
1010 1020 1030 1040 1050
LKQAAPNETD RLTHAFRRVL TRYPVPEELA ILGALRRAEH ERLAAQKDPQ
1060 1070 1080 1090 1100
ATAWTLLAGP EAANHPERRP DLPNQVDPIE AASWVAVARA LLNLDEAIVR

E
Length:1,101
Mass (Da):123,243
Last modified:April 5, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE1AB84405566171C
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP002353 Genomic DNA Translation: ADV60907.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ADV60907; ADV60907; Isop_0312

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ipa:Isop_0312

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002353 Genomic DNA Translation: ADV60907.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi575540.Isop_0312

Protein family/group databases

TCDBi1.B.14.17.3, the outer membrane receptor (omr) family

Genome annotation databases

EnsemblBacteriaiADV60907; ADV60907; Isop_0312
KEGGiipa:Isop_0312

Phylogenomic databases

eggNOGiCOG2010, Bacteria
HOGENOMiCLU_005632_1_0_0
OMAiHGGWNSD
OrthoDBi520387at2

Family and domain databases

InterProiView protein in InterPro
IPR011429, Cyt_c_Planctomycete-type
IPR011444, DUF1549
IPR022655, DUF1553
PfamiView protein in Pfam
PF07635, PSCyt1, 1 hit
PF07583, PSCyt2, 1 hit
PF07587, PSD1, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE8QX74_ISOPI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E8QX74
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 7, 2020
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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