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Protein
Submitted name:

Peroxisomal biogenesis factor 5

Gene

pex5

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-8866654 E3 ubiquitin ligases ubiquitinate target proteins
R-DRE-9033241 Peroxisomal protein import

Names & Taxonomyi

Protein namesi
Submitted name:
Peroxisomal biogenesis factor 5Imported
Gene namesi
Name:pex5Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-040426-981 pex5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiE7FGF7

Expressioni

Gene expression databases

BgeeiENSDARG00000070654
ExpressionAtlasiE7FGF7 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini321 – 578TPR_REGIONInterPro annotationAdd BLAST258
Repeati321 – 354TPRPROSITE-ProRule annotationAdd BLAST34
Repeati355 – 388TPRPROSITE-ProRule annotationAdd BLAST34
Repeati477 – 510TPRPROSITE-ProRule annotationAdd BLAST34
Repeati511 – 544TPRPROSITE-ProRule annotationAdd BLAST34
Repeati545 – 578TPRPROSITE-ProRule annotationAdd BLAST34

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili426 – 446Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, TPR repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1125 Eukaryota
ENOG410XQ6Q LUCA
GeneTreeiENSGT00390000013941
InParanoidiE7FGF7
OrthoDBiEOG091G07HM

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR024113 PTS1R
IPR024111 PTS1R_family
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
PANTHERiPTHR10130 PTHR10130, 1 hit
PTHR10130:SF2 PTHR10130:SF2, 1 hit
SMARTiView protein in SMART
SM00028 TPR, 5 hits
SUPFAMiSSF48452 SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 5 hits
PS50293 TPR_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

E7FGF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMRELVEAE CGGANPLMKL TGHMTQEGGA WRHRSTPTIP PTPIEIATEE
60 70 80 90 100
ELVSEFLQGP QRPPHSFDMG QLLEEMQQID QQNYRQAPQR APDVAALALS
110 120 130 140 150
GDWASEFLST ADAASSSGQA ALDPADADWT REFINEVADP GRWAEEYLEQ
160 170 180 190 200
SEEKLWLGDL GEREQDKEWA QEYQSGEELR QTANELVAKV DDPKLQNTEF
210 220 230 240 250
LRFIRQIGEG SVTVEDRAGK EHTDKAQAKE AEHWASSLNQ VSAESAESWV
260 270 280 290 300
DEFATYGPDF QQAKAAVESD VDFWEKLQQE WEEMAKRDAE AHPWLSDFDQ
310 320 330 340 350
MLSSSYDKGY QFEEDNPYLS HEDPFAEGVK RMEAGDIPGA VRLFESAVQR
360 370 380 390 400
QPDNQLAWQY LGTCQAENEQ EFAAISALRR CIELKKDNLT ALMALAVSFT
410 420 430 440 450
NESLHRQACE TLRDWLRHNP KYRIILEQHE REKQREGARE REKESERFGS
460 470 480 490 500
LLPEALFGEV QTLFLNAAAA EPSQVDPELQ CGLGVLFNLS GEYDKAVDCF
510 520 530 540 550
SAALSVTPQD YLLWNKLGAT LANGNRSEEA VAAYRRALEL QPGFVRSRYN
560 570 580 590 600
LGISCVNLGA HREAVEHFLE ALSLQRQAAG DGEAGAGRGP GAAATIMSDN
610 620 630 640
IWSTLRMALS MMGESSLYSA ADRRDLDTLL THFSHREGEA E
Length:641
Mass (Da):71,791
Last modified:January 20, 2016 - v2
Checksum:i9F90BA2D8FAFD781
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL929502 Genomic DNA No translation available.
CT027619 Genomic DNA No translation available.
RefSeqiXP_005173531.1, XM_005173474.3

Genome annotation databases

EnsembliENSDART00000123142; ENSDARP00000112065; ENSDARG00000070654
ENSDART00000185049; ENSDARP00000153731; ENSDARG00000116397
ENSDART00000190436; ENSDARP00000148014; ENSDARG00000116156

Similar proteinsi

Entry informationi

Entry nameiE7FGF7_DANRE
AccessioniPrimary (citable) accession number: E7FGF7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: January 20, 2016
Last modified: June 20, 2018
This is version 55 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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