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Protein

Stathmin

Gene

stmn3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • tubulin binding Source: GO_Central

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
StathminUniRule annotation
Gene namesi
Name:stmn3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 6

Organism-specific databases

ZFINiZDB-GENE-081124-2 stmn3

Subcellular locationi

PTM / Processingi

Proteomic databases

PaxDbiE7FFU5

Expressioni

Gene expression databases

BgeeiENSDARG00000038465 Expressed in 5 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000056133

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili83 – 132Sequence analysisAdd BLAST50
Coiled coili142 – 181Sequence analysisAdd BLAST40

Sequence similaritiesi

Belongs to the stathmin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IEAZ Eukaryota
ENOG4111H1E LUCA
GeneTreeiENSGT00390000003691
OMAiMEMSKEN
OrthoDBiEOG091G0Y2U
PhylomeDBiE7FFU5

Family and domain databases

InterProiView protein in InterPro
IPR028835 Stathmin-3
IPR030514 Stathmin_CS
IPR000956 Stathmin_fam
IPR036002 Stathmin_sf
PANTHERiPTHR10104 PTHR10104, 1 hit
PTHR10104:SF17 PTHR10104:SF17, 1 hit
PfamiView protein in Pfam
PF00836 Stathmin, 1 hit
PIRSFiPIRSF002285 Stathmin, 1 hit
PRINTSiPR00345 STATHMIN
SUPFAMiSSF101494 SSF101494, 1 hit
PROSITEiView protein in PROSITE
PS00563 STATHMIN_1, 1 hit
PS51663 STATHMIN_3, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

E7FFU5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDSTLSAYSD KLREMSVLSL ICSCLYNQPH PNTFGQFEDM EVKSLNKRAS
60 70 80 90 100
GQAFEVILKS PTDPSPERPQ TLALPPQRKE PSLGELQRRL EAAEARRRSQ
110 120 130 140 150
EKQVLKQLAE KREREKEVLT KAQEVNNNYS KKTEEKLNHK MEMITENRMA
160 170 180
RLNALKQRLR EKEIHAEEVR KNKELNTDLS G
Length:181
Mass (Da):21,005
Last modified:March 8, 2011 - v1
Checksum:i3C4E263945FDC8C3
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2R8Q5D3A0A2R8Q5D3_DANRE
Stathmin
stmn3
181Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU929258 Genomic DNA No translation available.
RefSeqiXP_001339376.4, XM_001339340.7
UniGeneiDr.90491

Genome annotation databases

EnsembliENSDART00000157018; ENSDARP00000128691; ENSDARG00000038465
GeneIDi798970
KEGGidre:798970

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU929258 Genomic DNA No translation available.
RefSeqiXP_001339376.4, XM_001339340.7
UniGeneiDr.90491

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000056133

Proteomic databases

PaxDbiE7FFU5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000157018; ENSDARP00000128691; ENSDARG00000038465
GeneIDi798970
KEGGidre:798970

Organism-specific databases

CTDi50861
ZFINiZDB-GENE-081124-2 stmn3

Phylogenomic databases

eggNOGiENOG410IEAZ Eukaryota
ENOG4111H1E LUCA
GeneTreeiENSGT00390000003691
OMAiMEMSKEN
OrthoDBiEOG091G0Y2U
PhylomeDBiE7FFU5

Gene expression databases

BgeeiENSDARG00000038465 Expressed in 5 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR028835 Stathmin-3
IPR030514 Stathmin_CS
IPR000956 Stathmin_fam
IPR036002 Stathmin_sf
PANTHERiPTHR10104 PTHR10104, 1 hit
PTHR10104:SF17 PTHR10104:SF17, 1 hit
PfamiView protein in Pfam
PF00836 Stathmin, 1 hit
PIRSFiPIRSF002285 Stathmin, 1 hit
PRINTSiPR00345 STATHMIN
SUPFAMiSSF101494 SSF101494, 1 hit
PROSITEiView protein in PROSITE
PS00563 STATHMIN_1, 1 hit
PS51663 STATHMIN_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE7FFU5_DANRE
AccessioniPrimary (citable) accession number: E7FFU5
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: November 7, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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