Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

E3 ubiquitin-protein ligase TRIM17

Gene

TRIM17

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase TRIM17Imported
Gene namesi
Name:TRIM17Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000162931.11
HGNCiHGNC:13430 TRIM17

Subcellular locationi

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000162931

PTM / Processingi

Proteomic databases

MaxQBiE5RJW6
PeptideAtlasiE5RJW6
PRIDEiE5RJW6

Expressioni

Gene expression databases

BgeeiENSG00000162931 Expressed in 84 organ(s), highest expression level in right hemisphere of cerebellum
ExpressionAtlasiE5RJW6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliE5RJW6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini67 – 108B box-typeInterPro annotationAdd BLAST42

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili170 – 190Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2177 Eukaryota
ENOG4111G04 LUCA
GeneTreeiENSGT00760000118893

Family and domain databases

CDDicd00021 BBOX, 1 hit
Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR032918 TRIM17
IPR027370 Znf-RING_LisH
IPR000315 Znf_B-box
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR24103:SF397 PTHR24103:SF397, 1 hit
PfamiView protein in Pfam
PF00643 zf-B_box, 1 hit
PF13445 zf-RING_UBOX, 1 hit
SMARTiView protein in SMART
SM00336 BBOX, 1 hit
PROSITEiView protein in PROSITE
PS50119 ZF_BBOX, 1 hit
PS00518 ZF_RING_1, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.iShow all

E5RJW6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTTCGHNFCR ACIQLSWEKA RGKKGRRKRK GSFPCPECRE MSPQRNLLPN
60 70 80 90 100
RLLTKVAEMA QQHPGLQKQD LCQEHHEPLK LFCQKDQSPI CVVCRESREH
110 120 130 140 150
RLHRVLPAEE AVQGYKLKLE EDMEYLREQI TRTGNLQARE EQSLAEWQGK
160 170 180 190 200
VKERRERIVL EFEKMNLYLV EEEQRLLQAL ETEEEETASR LRESVACLDR
210 220 230 240 250
QGHSLELLLL QLEERSTQGP LQMLQDMKEP LSRKNNVSVQ CPEVAPPTRP
260
RTVCRVPGQI EVLRGFL
Length:267
Mass (Da):31,189
Last modified:February 8, 2011 - v1
Checksum:i1B41BAA88A0B53F2
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9Y577TRI17_HUMAN
E3 ubiquitin-protein ligase TRIM17
TRIM17 RBCC, RNF16, TERF
477Annotation score:
J3KNZ3J3KNZ3_HUMAN
E3 ubiquitin-protein ligase TRIM17
TRIM17
175Annotation score:
E5RI62E5RI62_HUMAN
E3 ubiquitin-protein ligase TRIM17
TRIM17
50Annotation score:
J3KQG0J3KQG0_HUMAN
E3 ubiquitin-protein ligase TRIM17
TRIM17
30Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei267Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL139288 Genomic DNA No translation available.
AL670729 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000479800; ENSP00000430468; ENSG00000162931
UCSCiuc057qev.1 human

Similar proteinsi

Entry informationi

Entry nameiE5RJW6_HUMAN
AccessioniPrimary (citable) accession number: E5RJW6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: September 12, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again