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Entry version 43 (05 Jun 2019)
Sequence version 1 (08 Feb 2011)
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Protein
Submitted name:

Uncharacterized protein

Gene

GSOID_T00002513001

Organism
Oikopleura dioica (Tunicate)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:GSOID_T00002513001Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOikopleura dioica (Tunicate)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri34765 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataTunicataAppendiculariaCopelataOikopleuridaeOikopleura

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini132 – 268PHInterPro annotationAdd BLAST137
Domaini627 – 806DHR-1InterPro annotationAdd BLAST180
Domaini1525 – 1982DHR-2InterPro annotationAdd BLAST458

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the DOCK family.PROSITE-ProRule annotation

Phylogenomic databases

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E4X5U3

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.30.29.30, 1 hit
2.60.40.150, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR035892 C2_domain_sf
IPR027007 DHR-1_domain
IPR027357 DHR-2
IPR026791 DOCK
IPR010703 DOCK_C
IPR021816 DOCK_C/D_N
IPR011993 PH-like_dom_sf
IPR001849 PH_domain

The PANTHER Classification System

More...
PANTHERi
PTHR23317 PTHR23317, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF06920 DHR-2, 2 hits
PF14429 DOCK-C2, 1 hit
PF11878 DUF3398, 1 hit
PF00169 PH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00233 PH, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51650 DHR_1, 1 hit
PS51651 DHR_2, 1 hit
PS50003 PH_DOMAIN, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

E4X5U3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDRNRVNAL IDDPGPVEPI DFERHLAGKR FQIQNDVCKH LLQLPDEPYV
60 70 80 90 100
EVREAEKRTA VSEIPAYEST QIDPVVLSAI EQYAAPRSTV INIHEAQYGK
110 120 130 140 150
NYKQLPPNEL QQNIFPLQYE PDIDKENEVI NPSDKRGWLF KLKSTVSNSE
160 170 180 190 200
KFSMKELNRD GKKRWAVLRK VQEGDDTTGY LLECLKDEKE EHKGKNAKGV
210 220 230 240 250
TYFLAEPIFE AFPFDEMSKD QKKRFGFELR MQNLENDDNE EITVNAVFVA
260 270 280 290 300
ENEEDRDDWV SRINDALASS KRQELEEDSD PEDIVDEEKI QSRFSATQNN
310 320 330 340 350
SIYSYLKESQ RYEDLARKRK RNRNRILALS SQRENLSSAQ NSKMAEISEI
360 370 380 390 400
VEDQIKPVRF VLRAAALQFH LRGAVREQNI EITNLEPFFV TFALFDAKSR
410 420 430 440 450
KKISADFHAQ MNDEMLKNLT NPVGINDYVS QMFGEPERKK INYSWIENPK
460 470 480 490 500
QAIFDIYQPH EQIYLVAKIE RVLQGSISKT SQPYCEKADS EKIVNSIIKQ
510 520 530 540 550
VKSACNRIPE HRMPFAWGAV SLFDKKGAFA PAGFHSVRTG EQENYQLPFG
560 570 580 590 600
DLYRQEANKL KNEELFRFLA EIGKTEPLKE NEQLVDVLTS SLQPVKPYHA
610 620 630 640 650
AGADPYFEVD NFEDIPQQLA APFHNYLNHL YIRPISLKYD AQKSFPKARN
660 670 680 690 700
ITISCELWNG DEPASSRKLC VFYTRPETRG LIFDTSRHTA VSHHQTCPQF
710 720 730 740 750
YEEIKVELPP NIHDGHHVKI VIYHVSVDPK KTPKKSGMES VLTEIGSSWI
760 770 780 790 800
RLRQIDGRLD LKQKYELPVY VTDGENKTLP NHFLSCSSGN WVDGMKKLLE
810 820 830 840 850
IELFLVSTVQ VTGKLIHSFL ANPFDLRTFM ALPGEEPIHL IHFMPLIINR
860 870 880 890 900
LLEITASDKI VEKPKYIPLA KKNEDENDSA FSTFVHIVSI LVENGQKENL
910 920 930 940 950
LKFIEDKLDL PKFPNLCDSV LSAIVNLLER VKKKQRQEQL LIYLDIFLKI
960 970 980 990 1000
QAKLMFQRIH RNQRKVRKKS EIFNSSFLTN LERFANKTCD HMNKLKNHSP
1010 1020 1030 1040 1050
WERSVDDSAS TRMRMPSVGF VSKLVASTIN HEVFFLDQNL DEQSLNLRLE
1060 1070 1080 1090 1100
ILSKLSEHEA FISLNYPNFA DTSLKSFKLT RSFVEKHFLA AELLRMVQFG
1110 1120 1130 1140 1150
LTSSSSAISY CRKKSLESLL SLLTKHTLDR RYSPAKDQSR IAQLYCPFVG
1160 1170 1180 1190 1200
FITRNLQNLN IGFTDLSEFK RNPSMRSASG ILNPASLDFD ALKMMLKCFF
1210 1220 1230 1240 1250
HISANLNEDV ISDFWSQCSS FEIENFFAIL SMAVYFFKFK ETKKTFDRMP
1260 1270 1280 1290 1300
SNLRVSLSAA QRKMERRSDE FEKHNFIRAG VYRSLILQNR PVEMLPTDED
1310 1320 1330 1340 1350
WAKHESAEFS LIALDLLHLY ISGARCTVAE RHRSNSQLQR KIFDLLLDLL
1360 1370 1380 1390 1400
DFCQPTLVFH NAFSLLRIFI KENRQSLFVH RTDYCQRIVF VALKACNSRI
1410 1420 1430 1440 1450
SAIRQNASAT LFFLVRAKQC FPKTPLHLLT CFSRISSFQI MGAIFRLISE
1460 1470 1480 1490 1500
KRVNQKLFQL ALTGLKQLAG NDSYSSNTNF LKNSFSGEVK DLIKKIRNVL
1510 1520 1530 1540 1550
VSTQQMKEHE DDPEKFSDLQ HTMAQSYSDS PEHRKTWLQE MARRHRENGN
1560 1570 1580 1590 1600
LIEAAMCYAH IAALVAQILN KNKLLDFGCK EFHDISENIP HDEGKPKESE
1610 1620 1630 1640 1650
EDLYSTLDVT ANLRKAAHLA RQADQPELVP KMLRLVTPLV EKEFQYGNLA
1660 1670 1680 1690 1700
ELFGEMKIAA EESAEFLRKK RFLGKYYRVV FYGSQWEDDQ SKILIYKEPK
1710 1720 1730 1740 1750
ITQLNEVRAR LEDLYKKRFP GAFEIITDSK PISEDELDSK IAFLQLTSVE
1760 1770 1780 1790 1800
PYFAKTPNFS TDFSLNHNLS KFCFETPFTK DGKARTDDVT KQWIRKTIIT
1810 1820 1830 1840 1850
TKHAFPYCTK RIQVVSENQI ELSFGWQKLF HLTAKILIQW NFYGSEIFSS
1860 1870 1880 1890 1900
ILEISLKIAI ISLEKKNSDL KEVVKEPVDV KKLHLCLQGS VMVQVNAGPM
1910 1920 1930 1940 1950
TYAEAFLRSG TGVIISPHHR KRLIEEYEQF VVLSAAALET NQNLLPPPTN
1960 1970 1980
PPSSEWRYHE SLFSGFNQIK TALASMELLS EDPNLV
Length:1,986
Mass (Da):229,229
Last modified:February 8, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE68AA23A006A3C32
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
FN653026 Genomic DNA Translation: CBY07532.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN653026 Genomic DNA Translation: CBY07532.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

InParanoidiE4X5U3

Family and domain databases

Gene3Di2.30.29.30, 1 hit
2.60.40.150, 1 hit
InterProiView protein in InterPro
IPR035892 C2_domain_sf
IPR027007 DHR-1_domain
IPR027357 DHR-2
IPR026791 DOCK
IPR010703 DOCK_C
IPR021816 DOCK_C/D_N
IPR011993 PH-like_dom_sf
IPR001849 PH_domain
PANTHERiPTHR23317 PTHR23317, 2 hits
PfamiView protein in Pfam
PF06920 DHR-2, 2 hits
PF14429 DOCK-C2, 1 hit
PF11878 DUF3398, 1 hit
PF00169 PH, 1 hit
SMARTiView protein in SMART
SM00233 PH, 1 hit
PROSITEiView protein in PROSITE
PS51650 DHR_1, 1 hit
PS51651 DHR_2, 1 hit
PS50003 PH_DOMAIN, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE4X5U3_OIKDI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E4X5U3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 5, 2019
This is version 43 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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