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Entry version 45 (02 Jun 2021)
Sequence version 1 (08 Feb 2011)
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Protein

Peptidase S74 domain-containing protein

Gene

Palpr_1089

Organism
Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Peptidase S74 domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Palpr_1089Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPaludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri694427 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPaludibacteraceaePaludibacter
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008718 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
694427.Palpr_1089

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini3016 – 3106Peptidase S74InterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili3099 – 3138Sequence analysisAdd BLAST40

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG2911, Bacteria
COG4675, Bacteria
COG5295, Bacteria

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_225675_0_0_10

Identification of Orthologs from Complete Genome Data

More...
OMAi
TDANAGI

Database of Orthologous Groups

More...
OrthoDBi
1619298at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR030392, S74_ICA

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13884, Peptidase_S74, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51688, ICA, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

E4T3E3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIYKVLKERH FFLLMIALGS FVLPVSAQNK IGNNPTVIQD GSLLELESMT
60 70 80 90 100
KGLRISRIVL DDINSWSPLD GSPVSGMLVF NEKGEAPKGL YYWDIVSSRW
110 120 130 140 150
VRVVNTAELT SLIAGSTQVS NTITGNSLVT TVNGVTSLGE DIIKNNNLSV
160 170 180 190 200
VNGILISTIN GVASSPGIPL LVSADNGLTH INGNVQLGGL LTKPTTIETS
210 220 230 240 250
QTNTLSVTGL QTGDAKADNL LVVAPGTGLL REISASALSR EKLSAGTGLT
260 270 280 290 300
GLDFDGSAAK TWSVDDTKIP YLPSGFSSGY LKYNGTNWLF DTSSYITSIN
310 320 330 340 350
GLANTNQTIS TGTSGTDFNV QSSGSTHTFN LPDASSGQRG ALTSTDWKTF
360 370 380 390 400
NDKVGSVSAG SSKVVIGGTS TAPTVDVNTS DLGTVTLQTG VTGTDVNVGG
410 420 430 440 450
LPANLGGTLT LNIPLASASN TGKLSNTDWT TFNDKIGSVT ASTPAAVSTS
460 470 480 490 500
GTTATILNTD AYWNANQINS GSVPVSASYI ATNAAGQLVG ATTPVTTITG
510 520 530 540 550
TTDQVIASSS TGDVTLSLPQ SIATTSSPTF SGLTVSGLNS KGLVTNNSTG
560 570 580 590 600
VLSTTTGTGF VTINGSGDVV YDNSNYLKNN ESITFTASGD ITGTASGITS
610 620 630 640 650
LSPALTIGSN AVTYSKLQQV AASSLVGNAT GSSANAQNIT LGTGLSFSGS
660 670 680 690 700
NLETFNIPNS SLINSKVTVN GTDIALGSSG TITAVSPNKL SAGTGLTGSD
710 720 730 740 750
FDGSAARTWS VDDTKIPYLP SGFSSGYLKY NGTNWLFDTS SYITSINGLT
760 770 780 790 800
NANQTISTGT NGTDFNVQSL GSTHTFNLPD ASSSQRGALT STDWTTFNDK
810 820 830 840 850
IGSVTASTPG AVSTSGTTAT IQNTAAYWNA NQINSGSVPL SMSYIATNAT
860 870 880 890 900
GQLVGATTPV TTITGTTDQV IASSSTGDVT LSLPQSIATT SSPTFSGLTV
910 920 930 940 950
SGLNAKGLVS NSSTGVLSTT TGTGFVTING SGDVVYDNSA YLKNNESITF
960 970 980 990 1000
AASGDITGST SGTTSLSPAL TIGSNAVTYS KLQQVAASSL VGNATGSSAD
1010 1020 1030 1040 1050
AQNITLGTGL GFSGSSLETS NIPNSSLVNS KVTVNGTDIA LGSSGTITAV
1060 1070 1080 1090 1100
SPNKLSAGTG LTGSDFDGSA ARTWTVDDTK VPYLPSGFSS GYLKYNGTNW
1110 1120 1130 1140 1150
LFDTSSYITS INGLTNASQT ISTGTSGTDF NVQSSGSTHT FNLPDASSSQ
1160 1170 1180 1190 1200
RGALISTDWK TFNDKIGSVT GSTPAAVSTS GTTATILNTG AYWNANQINS
1210 1220 1230 1240 1250
GSVPASASYI ATNTNGQLVG ATTPVTTITG TTDQVIASSS TGDVTLSLPQ
1260 1270 1280 1290 1300
SIASTSSPTF SGLTVSGLNS KGLVTNSSAG VLSTTTGTGF VTINGSGDVV
1310 1320 1330 1340 1350
YDNSAYLKNN ESITFTASGD ITGTASGTTA LSPALTIGSN AVTYSKLQQV
1360 1370 1380 1390 1400
AGSSLIGNAT GSLANAQNIT LGTGLSFSGS SIETSNIPNS SLVNSKVTVN
1410 1420 1430 1440 1450
GTDIALGSSG TITAVSPNKL SAGTGLTGSD FDGSAAQTWT VTPATNSTLG
1460 1470 1480 1490 1500
GVIVGTGLSA ASGTISVNTS QNITNLSNLT AGIVHSNASG NLSSSSVNLA
1510 1520 1530 1540 1550
SGDVTGILPV ANGGTGVNSL TGNGILYGNG IGAVQATSAG TNGYVLISTG
1560 1570 1580 1590 1600
TAAPAWKDPT TLPNIYTANG TLTANRTVTQ ANYALDFTNS KTSGSAFDVT
1610 1620 1630 1640 1650
GTGAYTGTGL FNVTANSATT GTLANISSSS LTEGTGLSIT SSSSSLNSTN
1660 1670 1680 1690 1700
GLLYVANASA STDGTVGRIQ SNSTSGSGLT VMANGKVGIG TSAPVATLHN
1710 1720 1730 1740 1750
TGSTVLGFNV VNNSDPTFIP GNSDPVDNYS GLVIVQDTYD VAITLPAPTD
1760 1770 1780 1790 1800
KTPGRLFTIA NSGTSTNYVS VKSCTLPIGM SVTLVWDGNQ WTESLASPIT
1810 1820 1830 1840 1850
IVNGSNLFST GLPGTGSGVT GSLSSNFFGE KAGQNATGAS YSNFLGNGAG
1860 1870 1880 1890 1900
ADATSASSSN FLGQNAGLGA ISASFSNFIG EGAGYYANLA RNSNFIGQNA
1910 1920 1930 1940 1950
GYNASSAQYS TLIGYNVGND GLSGNHIGKN NIIIGTNITL PATTENSINI
1960 1970 1980 1990 2000
GGVLFGKNTY SSASGNPSTA ASNNGSIGIG VASPAARLHL PAGGAASGMA
2010 2020 2030 2040 2050
PLKFTTSANK VAVLEEGAME YANSHLYFTT ATERLQLDYP IASAMPLNGL
2060 2070 2080 2090 2100
TDAKANNSIN NGNFTQTWNW NAATSGNLFS LANSNAAHTG SLFSLSSSTT
2110 2120 2130 2140 2150
TGTVQSIAGN SLSSGNLLSV SSSSSALNSS TKGLLYVANT GLSTSGLLAR
2160 2170 2180 2190 2200
FAANTNPGSG LTIKTDGNVG IGTDNPQSAL DIKGDMQLIN ASSESVRLQA
2210 2220 2230 2240 2250
PASLSSYTLI LPENQGQSGQ LLVNDGTGAL SWASGLTNGL AAGRMFVGNA
2260 2270 2280 2290 2300
SGIATAVLMD GDATLDNNGI LTLKDVNPNS GSYGSVAAIP QFTVDATGRI
2310 2320 2330 2340 2350
TAAASVSTAG IPVGGDVSGT VSAVTVNKLK GNSLLFSSLT DGDLLKYTSS
2360 2370 2380 2390 2400
GWVNWTPNYI ARTALSATTP LTYNNATGVF AISQATNSTN GYLSSNDWTT
2410 2420 2430 2440 2450
FNNKQNAIAL TTTGTGGAAT FSGGTLNIPN YTYTLPTATA SVKGGVTVGA
2460 2470 2480 2490 2500
GLQMTGDVIS TVNNGTVTTV SSGNLTPLFS TSVANAGSTP TISYTLTNAG
2510 2520 2530 2540 2550
ANTLFGNNTG SSAAPSYFQS SALPVGGDIS GTLGATNVDK LKGTAISITS
2560 2570 2580 2590 2600
LSANNILKYD GSNWVNWTPN FLTLSALSAT APITYDSGTG AIGITQATNS
2610 2620 2630 2640 2650
TDGYLSSGNW TTFNNKVTSV GAGSTKVTIG GTTTEPTIDV NTANLGSITL
2660 2670 2680 2690 2700
ATGTTGVDVN VSGSPASLGG TLTLNIPDAG TSARGVVNTG AQTFAGAKTF
2710 2720 2730 2740 2750
NSAITAPTSG NTMNGLIVNS GALSGITGYA QASGNFAISG SGTFSTGTGN
2760 2770 2780 2790 2800
ISLNGNTTLA AGKTLAFTDA SNSYSTSFTA GSQSANISYT LPTAGPTVNG
2810 2820 2830 2840 2850
QVLSGTTAGA LSWTTPTTYV NVIGTIDSQT KAANGAVISG NSLYMQTADA
2860 2870 2880 2890 2900
SSAGLVSATT QTFAGAKTFS STVTSTGFVK SGGTSAQFLK ADGSVDAATY
2910 2920 2930 2940 2950
LTTAAAAGAY LPLSGGTLTG ALSGTTATFS GIVKSGTGAG FQSAGYVANA
2960 2970 2980 2990 3000
ANNIWCFASA TPYGMSYYQG TALVGVGDAI GFHFGNQAAP VFYVNATGNA
3010 3020 3030 3040 3050
VVSGSITAGG NVTAYSDIRL KKNIQTLPNV SESLRKINAV EFDRKDIKIH
3060 3070 3080 3090 3100
QLGFIAQNVQ QYFPDLVTIA KDSMSTLSLN YQAMTAPLLK GWQEHDAVII
3110 3120 3130
SQQAEIEAQH QEIDLLKKEI EFLKINQEEL KKLITNKK
Length:3,138
Mass (Da):315,266
Last modified:February 8, 2011 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCD21013DECDF8DFD
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP002345 Genomic DNA Translation: ADQ79237.1

NCBI Reference Sequences

More...
RefSeqi
WP_013444606.1, NC_014734.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ADQ79237; ADQ79237; Palpr_1089

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ppn:Palpr_1089

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002345 Genomic DNA Translation: ADQ79237.1
RefSeqiWP_013444606.1, NC_014734.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi694427.Palpr_1089

Genome annotation databases

EnsemblBacteriaiADQ79237; ADQ79237; Palpr_1089
KEGGippn:Palpr_1089

Phylogenomic databases

eggNOGiCOG2911, Bacteria
COG4675, Bacteria
COG5295, Bacteria
HOGENOMiCLU_225675_0_0_10
OMAiTDANAGI
OrthoDBi1619298at2

Family and domain databases

InterProiView protein in InterPro
IPR030392, S74_ICA
PfamiView protein in Pfam
PF13884, Peptidase_S74, 1 hit
PROSITEiView protein in PROSITE
PS51688, ICA, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE4T3E3_PALPW
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E4T3E3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 2, 2021
This is version 45 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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