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Protein
Submitted name:

Glycoside hydrolase family 43

Gene

Palpr_0911

Organism
Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciPPRO694427:G1GQ6-902-MONOMER

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 43Imported
Gene namesi
Ordered Locus Names:Palpr_0911Imported
OrganismiPaludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4)Imported
Taxonomic identifieri694427 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPaludibacteraceaePaludibacter
Proteomesi
  • UP000008718 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500318755824 – 482Sequence analysisAdd BLAST459

Interactioni

Protein-protein interaction databases

STRINGi694427.Palpr_0911

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini375 – 444Ricin B-type lectinInterPro annotationAdd BLAST70

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107PMW Bacteria
COG3507 LUCA
HOGENOMiHOG000109499
KOiK06113
OMAiATHGSCC
OrthoDBiPOG091H0Y96

Family and domain databases

Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PF14200 RicinB_lectin_2, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF75005 SSF75005, 1 hit

Sequencei

Sequence statusi: Complete.

E4T2W7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKIKIVGAT ALLSVLLTGS AVAQIGKPFI HDPSTIVECD GKYYTFGTGG
60 70 80 90 100
GGLISEDGWT WNSGAVRPGG GAAPDAIKIG DRYLVVYGST GGGLGGGHDG
110 120 130 140 150
KLNTMWNKTL DPKSPDFKFT ESVVVASSAN MEDCDAIDPG LLLDPTDGRL
160 170 180 190 200
WMSYGTYFGF IRLVELDPKT GKRVEGNKEI NIAIDCEASD LMYRDGWYYL
210 220 230 240 250
LGTHGTCCDG ANSTYNIVVG RSRKVTGPYI DNMGRDMLEG GGKMVVAAGG
260 270 280 290 300
RVTGPGHFGR FIVADGVEKM SCHYEADLDQ SGRSVLAIRP LLWKNGWPVA
310 320 330 340 350
GDNFKEGTYE IESERRGYAL ELVVDFVRMA GGMRGFGRNT DEPIKPVASQ
360 370 380 390 400
ELADVIKTWP TGNTGVRIGD YMFRPHQKWT ITAVPEAGGY IGGPYYKIVI
410 420 430 440 450
AGTERALAAT ADAEVITVPT FTGAPEQLWR IDQLTDGTYR IMPKVVPNSN
460 470 480
EKLALVSSGD STPTLAPFNM NSDNSKWNFK AH
Length:482
Mass (Da):51,988
Last modified:February 8, 2011 - v1
Checksum:iED037888CF3368B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002345 Genomic DNA Translation: ADQ79061.1
RefSeqiWP_013444430.1, NC_014734.1

Genome annotation databases

EnsemblBacteriaiADQ79061; ADQ79061; Palpr_0911
KEGGippn:Palpr_0911

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002345 Genomic DNA Translation: ADQ79061.1
RefSeqiWP_013444430.1, NC_014734.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi694427.Palpr_0911

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GH43 Glycoside Hydrolase Family 43

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADQ79061; ADQ79061; Palpr_0911
KEGGippn:Palpr_0911

Phylogenomic databases

eggNOGiENOG4107PMW Bacteria
COG3507 LUCA
HOGENOMiHOG000109499
KOiK06113
OMAiATHGSCC
OrthoDBiPOG091H0Y96

Enzyme and pathway databases

BioCyciPPRO694427:G1GQ6-902-MONOMER

Family and domain databases

Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PF14200 RicinB_lectin_2, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF75005 SSF75005, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE4T2W7_PALPW
AccessioniPrimary (citable) accession number: E4T2W7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: February 28, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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