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Protein
Submitted name:

Uncharacterized protein

Gene

CRE_17695

Organism
Caenorhabditis remanei (Caenorhabditis vulgaris)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CRE_17695Imported
OrganismiCaenorhabditis remanei (Caenorhabditis vulgaris)Imported
Taxonomic identifieri31234 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008281 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei280 – 302HelicalSequence analysisAdd BLAST23
Transmembranei311 – 329HelicalSequence analysisAdd BLAST19
Transmembranei341 – 362HelicalSequence analysisAdd BLAST22
Transmembranei394 – 416HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500317907318 – 420Sequence analysisAdd BLAST403

Interactioni

Protein-protein interaction databases

STRINGi31234.CRE17695

Structurei

3D structure databases

ProteinModelPortaliE3NSE8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini103 – 188Neur_chan_LBDInterPro annotationAdd BLAST86
Domaini285 – 371Neur_chan_membInterPro annotationAdd BLAST87

Sequence similaritiesi

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification]SAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3645 Eukaryota
ENOG410XQGR LUCA
InParanoidiE3NSE8
OrthoDBiEOG091G0AFI

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit

Sequencei

Sequence statusi: Complete.

E3NSE8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFLLIVIST MFGSITPFYY NSELYVPKYK DFLDVQTNLT DQLFKDYNPT
60 70 80 90 100
VSPVYTWIDV EQPIGYDREA PKRWNYTVFL YYLKLVEVKE PEEKVSVVLE
110 120 130 140 150
LMEFHNTTTF YTRQDNVWSP TLTAFGEFRN DIMDFRDQDN RMVCVDNTGF
160 170 180 190 200
LWNYISVRVS ANCQMDVSRF PFDTQICQIQ FCLPIFYRVQ VEVLSEIYEG
210 220 230 240 250
IMDEKIFKTM VSLIRFIDPQ CLFQGNSEWK LINLTNRVEV LKYNDNMGNM
260 270 280 290 300
DLVRVTVIRK YPLFLFQAIF EITIRRNPLY YIYMIVFPSF VINFVSIVGV
310 320 330 340 350
FLNGADKMSR LNVGLTNIMT MTFILGVMAD KIPRTGNIPL LGIYIIINLV
360 370 380 390 400
IMFIAIAIVT AITELRRWAT PRLKLKRTAL RTQIETFLGP PLEYTCAIIL
410 420
ELMTCANFMV MIGFWFDDGS
Length:420
Mass (Da):49,230
Last modified:January 11, 2011 - v1
Checksum:i1817D2CFD17BEBDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS269944 Genomic DNA Translation: EFO90112.1
RefSeqiXP_003088673.1, XM_003088625.1

Genome annotation databases

EnsemblMetazoaiCRE17695; CRE17695; WBGene00073596
GeneIDi9813295

Similar proteinsi

Entry informationi

Entry nameiE3NSE8_CAERE
AccessioniPrimary (citable) accession number: E3NSE8
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: February 28, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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