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Protein
Submitted name:

Uncharacterized protein

Gene

BBIF_1476

Organism
Bifidobacterium bifidum (strain S17)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Protein family/group databases

CAZyiCBM32 Carbohydrate-Binding Module Family 32
GH20 Glycoside Hydrolase Family 20

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:BBIF_1476Imported
OrganismiBifidobacterium bifidum (strain S17)Imported
Taxonomic identifieri883062 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
Proteomesi
  • UP000006869 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1601 – 1622HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 32Sequence analysisAdd BLAST32
ChainiPRO_500316835133 – 1627Sequence analysisAdd BLAST1595

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 172F5/8 type CInterPro annotationAdd BLAST148
Domaini173 – 331F5/8 type CInterPro annotationAdd BLAST159

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000166222
KOiK12373
OMAiVEMNLWS

Family and domain databases

Gene3Di2.60.120.260, 3 hits
3.30.379.10, 1 hit
InterProiView protein in InterPro
IPR022038 Bacterial_Ig-like
IPR025705 Beta_hexosaminidase_sua/sub
IPR013320 ConA-like_dom_sf
IPR000421 FA58C
IPR008979 Galactose-bd-like_sf
IPR015883 Glyco_hydro_20_cat
IPR017853 Glycoside_hydrolase_SF
IPR029018 Hex-like_dom2
IPR015882 HEX_bac_N
PfamiView protein in Pfam
PF07523 Big_3, 2 hits
PF00754 F5_F8_type_C, 2 hits
PF00728 Glyco_hydro_20, 1 hit
PF02838 Glyco_hydro_20b, 1 hit
PRINTSiPR00738 GLHYDRLASE20
SUPFAMiSSF49785 SSF49785, 3 hits
SSF49899 SSF49899, 1 hit
SSF51445 SSF51445, 1 hit
SSF55545 SSF55545, 1 hit
PROSITEiView protein in PROSITE
PS50022 FA58C_3, 2 hits

Sequencei

Sequence statusi: Complete.

E3ERA6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLRRVKAAI GSVLAAVTLL SMSLTGVTAA QASDDNLALN QTVTASSYEV
60 70 80 90 100
ATTAPEKAVD GDLGTRWGTA QNKAANEWIE VGLGGTKTVK QINIDFERKD
110 120 130 140 150
ADQNITSFKV ELKQGDTYTK VYQKDTRAKQ QEIILLDQAQ QASAVKVTVL
160 170 180 190 200
SADGGTMNWV NVGINEISVY SAPKETVLDT ADTNHMLGAT MTASSNETAT
210 220 230 240 250
LTPDKAIDQN RTGRNNRWAS GYETPSNIWL KAEFPRLTAV KDIRIYFFER
260 270 280 290 300
DVNPKPTNVQ SFDLSYTDSE GTEHTLKSGY AMTASGAGYV ADVVIQLDQA
310 320 330 340 350
VNARSLKLSN FAIKSSEYNN VSVAEWEAYS NDQAEPGATL DSVVSDLESN
360 370 380 390 400
HLTIETDTDT LALPTVPDGY TVKFNGADYE QLIAADGTVN HPLVDKTVQV
410 420 430 440 450
AYVVTDTATG NTKTTSDIPY VVKGTNQQQE GNNAKPTIIP EIAEWHSTSA
460 470 480 490 500
AKLAASAVTK VVYDDDSLKA VVDEFVADYK DFTGIKLTAK KGAAEAGAFN
510 520 530 540 550
FVKTDSTAAI AQLGDEGYTM DIQADRVVAK SSSVTGNMYA MQTILQMTKQ
560 570 580 590 600
DASGFVIGSM RDYPRFTTRG LLLDVARKPV SLEMMREITR TMRYYKMNDF
610 620 630 640 650
QAHLSDNYIF LENYGKRDNE DEAFKAYDAF RLESSLTNDK GESPTAEDYS
660 670 680 690 700
ISKKTFKQFI QDERALGMNV VPEIDVPAHA NSFTKIWPEL MVKGRVSPIN
710 720 730 740 750
SNRPLIDHLD VSKPETIAKI KEIFDDYTKG DDPTFDSDTT VHIGADEFLY
760 770 780 790 800
NYTAYRKFIN EIVPYIKDTN TVRMWGGLTW INDHKTEITK DAIENVEMNL
810 820 830 840 850
WSKDWADGLQ MYNMGYKLIN TIDDYGYMVP NGSYGRANAY GDLLNISRVF
860 870 880 890 900
DSFEPNKVRS SGGYQAVPSG DDQMLGAAFA IWSDNIDKSA SGLTESDLYW
910 920 930 940 950
RFFDAMPFYA EKTWAATGKE KGTAAKLTAL AAKQGTGPRT NPYYQATSKN
960 970 980 990 1000
SVYESYDFND GLADASGNGR DLTIGDGSKA AVKDQSLKLA GGSSYATSKL
1010 1020 1030 1040 1050
DKLGNGNELT FDVTLQQAAK PGDILFEADA PYGTHDIRVM ENGKLGFTRE
1060 1070 1080 1090 1100
LYNYYFDYEL PVGKTVTVTI KVDQQTTKLY VDGEFVSDAT GKYIDKGIEK
1110 1120 1130 1140 1150
KTGITAATFA LPLQRIGSKT SAINGVIDNV IVKKSEAETD QYNKSCWTGT
1160 1170 1180 1190 1200
TNSETQYNDT EGLLRYAFDN NPSTIWHSNW KGATDKLTGS NSFYAEIDMC
1210 1220 1230 1240 1250
QKYTINQFSF TPRTSQDSGQ VTKADLYVKA NANDEWKQVA TDQVFEASRA
1260 1270 1280 1290 1300
KKTFMFDEQE VRYVKFVAKS SNDGWVAVSE FGVANKPSST VRVFVAADPA
1310 1320 1330 1340 1350
EGGTVSVAAE GETGTDTAVD VASGASVTAK AVAADGYRFS GWFTTASETA
1360 1370 1380 1390 1400
VSTDATYTFA ADGNTALTAK FTKDSTPDPG PKPTISSIAV TKPTVTDYKV
1410 1420 1430 1440 1450
GDTFDATGLA VTATMSDGST KTLTAGEYTL AATQDGAAVA LDKAFAKAGK
1460 1470 1480 1490 1500
VTVTVTANGK TATFDVTVTA KDPDPEPATL KSIKVTSKPD KTTYTVDETF
1510 1520 1530 1540 1550
AKTGLAVTGT WSDGKTALLK DSEYKLSAVD ADGKTVDLTK PFTAAGDVTV
1560 1570 1580 1590 1600
TVTSGKLTDS FTITVKAKTV TPTPGDNKPG ENKPGADKPK PNTPDEVAKT
1610 1620
GASVTAVVFS ALLLLSAGYL LVRKRRI
Length:1,627
Mass (Da):176,526
Last modified:January 11, 2011 - v1
Checksum:i0A0897CA1567DE38
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA Translation: ADO53681.1

Genome annotation databases

EnsemblBacteriaiADO53681; ADO53681; BBIF_1476
KEGGibbi:BBIF_1476

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA Translation: ADO53681.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM32 Carbohydrate-Binding Module Family 32
GH20 Glycoside Hydrolase Family 20

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO53681; ADO53681; BBIF_1476
KEGGibbi:BBIF_1476

Phylogenomic databases

HOGENOMiHOG000166222
KOiK12373
OMAiVEMNLWS

Family and domain databases

Gene3Di2.60.120.260, 3 hits
3.30.379.10, 1 hit
InterProiView protein in InterPro
IPR022038 Bacterial_Ig-like
IPR025705 Beta_hexosaminidase_sua/sub
IPR013320 ConA-like_dom_sf
IPR000421 FA58C
IPR008979 Galactose-bd-like_sf
IPR015883 Glyco_hydro_20_cat
IPR017853 Glycoside_hydrolase_SF
IPR029018 Hex-like_dom2
IPR015882 HEX_bac_N
PfamiView protein in Pfam
PF07523 Big_3, 2 hits
PF00754 F5_F8_type_C, 2 hits
PF00728 Glyco_hydro_20, 1 hit
PF02838 Glyco_hydro_20b, 1 hit
PRINTSiPR00738 GLHYDRLASE20
SUPFAMiSSF49785 SSF49785, 3 hits
SSF49899 SSF49899, 1 hit
SSF51445 SSF51445, 1 hit
SSF55545 SSF55545, 1 hit
PROSITEiView protein in PROSITE
PS50022 FA58C_3, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiE3ERA6_BIFBS
AccessioniPrimary (citable) accession number: E3ERA6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: February 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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