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Protein
Submitted name:

Leukotoxin translocation ATP-binding protein lktB

Gene

COK_0273

Organism
Mannheimia haemolytica serotype A2 str. BOVINE
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi515 – 522ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandATP-bindingPROSITE-ProRule annotationImported, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Leukotoxin translocation ATP-binding protein lktBImported
Gene namesi
ORF Names:COK_0273Imported
OrganismiMannheimia haemolytica serotype A2 str. BOVINEImported
Taxonomic identifieri669262 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeMannheimia
Proteomesi
  • UP000004125 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei166 – 188HelicalSequence analysisAdd BLAST23
Transmembranei200 – 221HelicalSequence analysisAdd BLAST22
Transmembranei277 – 302HelicalSequence analysisAdd BLAST26
Transmembranei308 – 328HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi669262.COK_0273

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 138Peptidase C39InterPro annotationAdd BLAST125
Domaini171 – 449ABC transmembrane type-1InterPro annotationAdd BLAST279
Domaini481 – 716ABC transporterInterPro annotationAdd BLAST236

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108JJA Bacteria
COG2274 LUCA
OrthoDBiPOG091H00DB

Family and domain databases

Gene3Di1.20.1560.10, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR010132 ATPase_T1SS_HlyB
IPR027417 P-loop_NTPase
IPR005074 Peptidase_C39
PfamiView protein in Pfam
PF00664 ABC_membrane, 1 hit
PF00005 ABC_tran, 1 hit
PF03412 Peptidase_C39, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
SSF90123 SSF90123, 1 hit
TIGRFAMsiTIGR01846 type_I_sec_HlyB, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 1 hit
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit
PS50990 PEPTIDASE_C39, 1 hit

Sequencei

Sequence statusi: Complete.

E2P558-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELPFYFIKG DNMEANHQRN DLGLVALTML AQYHNISLNP EEIKHKFDLD
60 70 80 90 100
GKGLSLTAWL LAAKSLALKA KHIKKEVSRL HLVNLPALVW QDNGKHFLLV
110 120 130 140 150
KVDTDNNRYL TYDLEKDAPQ ILSQDEFEAC YQGQLILVTS RASVVGQLAK
160 170 180 190 200
FDFTWFIPAV IKYRKIFLET LIVSIFLQIF ALITPLFFQV VMDKVLVHRG
210 220 230 240 250
FSTLNIITVA LAIVIIFEIV LSGLRTYVFS HSTSRIDVEL GAKLFRHLLS
260 270 280 290 300
LPISYFENRR VGDTVARVRE LDQIRNFLTG QALTSVLDLL FSFIFFAVMW
310 320 330 340 350
YYSPKLTLVI LGSLPCYILW SIFISPILRR RLDDKFARSA DNQAFLVESV
360 370 380 390 400
TAINMIKAMA VAPQMTDTWD KQLASYVSSS FRVTVLATIG QQGVQLIQKT
410 420 430 440 450
VMVINLWLGA HLVISGDLSI GQLIAFNMLS GQVIAPVIRL AQLWQDFQQV
460 470 480 490 500
GISVTRLGDV LNSPTEQYQG KLSLPEIKGD ISFKNIRFRY KPDAPTILNN
510 520 530 540 550
VNLEIRQGEV IGIVGRSGSG KSTLTKLLQR FYIPENGQVL IDGHDLALAD
560 570 580 590 600
PNWLRRQIGV VLQDNVLLNR SIRENIALSD PGMPMERVIY AAKLAGAHDF
610 620 630 640 650
ISELREGYNT IVGEQGAGLS GGQRQRIAIA RALVNNPKIL IFDEATSALD
660 670 680 690 700
YESEHIIMQN MQKICQGRTV ILIAHRLSTV KNADRIIVME KGEIVEQGKH
710 720
HELLQNSNGL YSYLHQLQLN
Length:720
Mass (Da):81,126
Last modified:November 30, 2010 - v1
Checksum:i9774D04745F4578F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACZY01000007 Genomic DNA Translation: EEY13620.1

Genome annotation databases

EnsemblBacteriaiEEY13620; EEY13620; COK_0273

Entry informationi

Entry nameiE2P558_MANHA
AccessioniPrimary (citable) accession number: E2P558
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: October 25, 2017
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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