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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Spirs_1345

Organism
Sediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) (Spirochaeta smaragdinae)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciSSMA573413:G1GM6-1366-MONOMER

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Spirs_1345Imported
OrganismiSediminispirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) (Spirochaeta smaragdinae)Imported
Taxonomic identifieri573413 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeSediminispirochaeta
Proteomesi
  • UP000002318 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi573413.Spirs_1345

Structurei

3D structure databases

ProteinModelPortaliE1R450
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 406AamyInterPro annotationAdd BLAST389

Phylogenomic databases

eggNOGiENOG4105CG3 Bacteria
COG0366 LUCA
HOGENOMiHOG000220640
KOiK01187
OMAiRDWYWWR
OrthoDBiPOG091H07J7

Family and domain databases

InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR006047 Glyco_hydro_13_cat_dom
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02806 Alpha-amylase_C, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

E1R450-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQLHRDDNW WKEGVIYQIY PRSFFDADGD GVGDLDGIRT RLDYLRELGV
60 70 80 90 100
SGIWISPINK SPMFDFGYDI SDYREIDPVF GDIEAFRRLL DEAHRRNIGV
110 120 130 140 150
IMDMVFNHTS VLHSWFIESR SSKDNPYRDF YVWRKPKKGG RVPNNWKASF
160 170 180 190 200
GGSCWSFDEK SGEYYLHSFL PEQPDLNWAN PRCRKAIFDE LEFWLKEGVD
210 220 230 240 250
GFRLDVINLI GKDPEFRDNP FTFGWPPRPY EMQRHLYDRN SPATGDYLRQ
260 270 280 290 300
LRRLLNRYPG SFAVGEIYLD KPVDQELAAS FTGVQDQLHL AFDFSLTFSP
310 320 330 340 350
WSARRFGSIF EGQYRAALRY GGTPCFVFSN HDVVRALSRY APSSDREMKE
360 370 380 390 400
AVAKLIGVML LTQGGTPFLY MGEEIGMENA AVPRSRLADP VGIRYWPFHK
410 420 430 440 450
GRDGERLPMQ WDGGPCAGFS SNPDARPWLP LHPNYQEVNV ADQQGRAGSV
460 470 480 490 500
LSCFKALIAL RSKYPALRRG GFTLIQAEEK ELLVYLREAD TKERFLVCVN
510 520 530 540 550
FSSKRHQSLK VENGRWRKLF STHASDFSEQ GTQVVIEQES MLAPLEGMIL

ISQ
Length:553
Mass (Da):63,671
Last modified:November 30, 2010 - v1
Checksum:i81533D6335DE9C9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002116 Genomic DNA Translation: ADK80472.1
RefSeqiWP_013253936.1, NC_014364.1

Genome annotation databases

EnsemblBacteriaiADK80472; ADK80472; Spirs_1345
KEGGissm:Spirs_1345

Similar proteinsi

Entry informationi

Entry nameiE1R450_SEDSS
AccessioniPrimary (citable) accession number: E1R450
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: March 28, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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