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Entry version 62 (02 Jun 2021)
Sequence version 4 (10 Apr 2019)
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Protein
Submitted name:

Uncharacterized protein

Gene

PATJ

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PATJImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiGallus gallus (Chicken)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9031 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000539 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 8

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSGALG00000010934, Expressed in cerebellum and 7 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
E1C4T3, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
9031.ENSGALP00000017768

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini5 – 65L27InterPro annotationAdd BLAST61
Domaini133 – 220PDZInterPro annotationAdd BLAST88
Domaini248 – 328PDZInterPro annotationAdd BLAST81
Domaini364 – 451PDZInterPro annotationAdd BLAST88
Domaini545 – 631PDZInterPro annotationAdd BLAST87
Domaini678 – 751PDZInterPro annotationAdd BLAST74
Domaini1045 – 1137PDZInterPro annotationAdd BLAST93
Domaini1223 – 1306PDZInterPro annotationAdd BLAST84
Domaini1445 – 1528PDZInterPro annotationAdd BLAST84
Domaini1541 – 1623PDZInterPro annotationAdd BLAST83
Domaini1686 – 1772PDZInterPro annotationAdd BLAST87

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni458 – 505DisorderedSequence analysisAdd BLAST48
Regioni642 – 667DisorderedSequence analysisAdd BLAST26
Regioni768 – 794DisorderedSequence analysisAdd BLAST27
Regioni1149 – 1182DisorderedSequence analysisAdd BLAST34
Regioni1788 – 1810DisorderedSequence analysisAdd BLAST23

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili9 – 29Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi485 – 505Basic and acidic residuesSequence analysisAdd BLAST21
Compositional biasi780 – 794Polar residuesSequence analysisAdd BLAST15
Compositional biasi1151 – 1171Basic and acidic residuesSequence analysisAdd BLAST21
Compositional biasi1796 – 1810Basic and acidic residuesSequence analysisAdd BLAST15

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0708, Eukaryota
KOG3528, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155136

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002378_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
E1C4T3

Identification of Orthologs from Complete Genome Data

More...
OMAi
ESHYILH

TreeFam database of animal gene trees

More...
TreeFami
TF330709

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.30.42.10, 10 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR015132, L27_2
IPR004172, L27_dom
IPR036892, L27_dom_sf
IPR001478, PDZ
IPR036034, PDZ_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF09045, L27_2, 1 hit
PF00595, PDZ, 9 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00569, L27, 1 hit
SM00228, PDZ, 10 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF101288, SSF101288, 1 hit
SSF50156, SSF50156, 10 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51022, L27, 1 hit
PS50106, PDZ, 10 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

E1C4T3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPENPAADKQ QVLQIIDRLQ AKLREKRDVQ HNENLSVLRN TLRSPLFNQI
60 70 80 90 100
LTLQQSIKQL KDQLNYMPPD RSVDFDFTKR GLLVFADKSV TAGNVCKQSS
110 120 130 140 150
LPEPRASTFI PNLGVNEFNA IIQQMAKGRQ IESIKIEKPS VGGLGFSVVT
160 170 180 190 200
LKNHNSGEVG IFVKEVQPGS VADRDQRLRE NDHILAINCT PLDQNISHQH
210 220 230 240 250
AIALLQQSTG SLHLVVAREP VQGNSRTSPV SLSDTNPPET IRWGHVENVE
260 270 280 290 300
LINDGSGLGF GIVGGKLSGV VVRTIVPGGL ADRDGRLQTG DHILQIGGTN
310 320 330 340 350
VQGMTSEQVA QVLRNCGNSV RMIVARNPKC EIAESPPAPE SWPVSALPSF
360 370 380 390 400
QNGNYNTVLF ETHDVELIKK NGQSLGITIV GYAGACDVES SGIFVKNIIP
410 420 430 440 450
GSAADHNGQI HVHDKIVAVD GVNIQDFTNQ EVVEALRNTG QTVRLTLLRR
460 470 480 490 500
RPSVVSSERC SDKVQQSVPA LASPGALGTE ASMDSRNEEN QKQKNNFQNE
510 520 530 540 550
KKQILHKSGR VPFPPAYDLK SKWENLLGPE YEVMVVNVDM PITDDSELQK
560 570 580 590 600
YSKLLPIHTL RLGVELDTFD GHHYISSIAS DGPAATLGLL QLEDELLEVN
610 620 630 640 650
GVQLYGKSRR EAITFLKEVP PPFTMVCCRR LFDDGSESLV DEPAVRVPSP
660 670 680 690 700
EQKVKPEENI NPEEEEGELA LWSPDVKIIE LEKDKNGLGF SILDYQDPLD
710 720 730 740 750
PTRTAIVISS LVAGGVAERG GELLPGDRLV FVNEKYLDST TLTEAVEVLK
760 770 780 790 800
SVPPGRVSLG ICKPLVGESK EEEENTHGMD TSNMKTSPGS PEPRDNTNFS
810 820 830 840 850
IILEAPQGFR DETPFKEEAV DEPILDLGRS FQLSQNDNGY EKESWEMREF
860 870 880 890 900
WKPTTEEVDE EREMLVDEYE EDLDFLKYSL SDRQKASSEK NLDTEWAEQL
910 920 930 940 950
KTAKIQDLRS SANLSPKQSL EYTFDSEQMY EENASITSQS SATTAHSDYQ
960 970 980 990 1000
KGLLDSGATQ SGSRNKMDLG TKLQMDSKIP GLTVDLEGVE KEEEGEDYMF
1010 1020 1030 1040 1050
SKNEKSVRVT TLPQPRTVLY SELPEREEGE GEETPNFSHW GPPRTVEIFR
1060 1070 1080 1090 1100
DPHVSLGISI VGGQTVIKRL KNGEELKGIF IKQVLEDSPA GRTRALKTGD
1110 1120 1130 1140 1150
KILEVSGIDL QNATHEEAVE AIKNAGNPVV FVVQSLSNVP KVVSAIHPKG
1160 1170 1180 1190 1200
MKVSKDQDAN KENKSEKRKY GAPPPMKLPP PYRALERLHS EEASVDEEEE
1210 1220 1230 1240 1250
EEDACAEKKI RQRYADLPGE LHIIELEKDK NGLGLSLAGN KDRSRMSIFV
1260 1270 1280 1290 1300
VGINPDGPAG RDGRMHIGDE LLEINNQILY GRSHQNASAI IKTAPSKVKL
1310 1320 1330 1340 1350
VFIRSEDAVN QMAVTPFPLP ISTHPSIEDH GCTETPSSEE DPSLDVVMKS
1360 1370 1380 1390 1400
LSDEEPNKAD VKYKADKPVL VDQSEVEEQL PEYVLKQMKQ SKSSAKVPVN
1410 1420 1430 1440 1450
LQEISVVSAP TYLSPDTEIT NRNVLPPPLP VDPATCPIVP GQEMTIEISK
1460 1470 1480 1490 1500
GRSGLGLSIV GGKDTPLDAI VIHEVYEEGA AARDGRLWAG DQILEVNGID
1510 1520 1530 1540 1550
LRNANHEEAI TALRQTPQKV QLVVYRDEAH YKDEENLEIF HVDIQKKTGR
1560 1570 1580 1590 1600
GLGLSIAGKR NGSGVFISDI VKGGAADLDG RLIQGDQILS VNGEDMRNAS
1610 1620 1630 1640 1650
QETVATVLKC AQGLVHLEVG RLRAGSWLSS RKTTQNSQVN QQSTHSHFHP
1660 1670 1680 1690 1700
TLAPVLSTLQ NFVSTKRSSA DVSQRNSVGA DTGPRTVEIT RGPNDALGIS
1710 1720 1730 1740 1750
IAGGKGSPLG DIPIFIAMIQ ASGVAARTQR LRVGDRIVSL NGQPLDGLSH
1760 1770 1780 1790 1800
ADAVNLLKNA YGSIILQVVA DTNISAIATQ LESMSAGCNV NSSSEHASED
1810
PEEQLRTMAD
Length:1,810
Mass (Da):198,275
Last modified:April 10, 2019 - v4
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i61BBE444E978E8EA
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1D5P022A0A1D5P022_CHICK
Uncharacterized protein
PATJ
1,891Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1D5PPK0A0A1D5PPK0_CHICK
Uncharacterized protein
PATJ
1,846Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AADN05000647 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSGALT00000017789; ENSGALP00000017768; ENSGALG00000010934

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN05000647 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000017768

Genome annotation databases

EnsembliENSGALT00000017789; ENSGALP00000017768; ENSGALG00000010934

Phylogenomic databases

eggNOGiKOG0708, Eukaryota
KOG3528, Eukaryota
GeneTreeiENSGT00940000155136
HOGENOMiCLU_002378_1_0_1
InParanoidiE1C4T3
OMAiESHYILH
TreeFamiTF330709

Gene expression databases

BgeeiENSGALG00000010934, Expressed in cerebellum and 7 other tissues
ExpressionAtlasiE1C4T3, baseline and differential

Family and domain databases

Gene3Di2.30.42.10, 10 hits
InterProiView protein in InterPro
IPR015132, L27_2
IPR004172, L27_dom
IPR036892, L27_dom_sf
IPR001478, PDZ
IPR036034, PDZ_sf
PfamiView protein in Pfam
PF09045, L27_2, 1 hit
PF00595, PDZ, 9 hits
SMARTiView protein in SMART
SM00569, L27, 1 hit
SM00228, PDZ, 10 hits
SUPFAMiSSF101288, SSF101288, 1 hit
SSF50156, SSF50156, 10 hits
PROSITEiView protein in PROSITE
PS51022, L27, 1 hit
PS50106, PDZ, 10 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiE1C4T3_CHICK
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: E1C4T3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: April 10, 2019
Last modified: June 2, 2021
This is version 62 of the entry and version 4 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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