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Protein
Submitted name:

Brachyury, putative

Gene

8237656

Organism
Pediculus humanus subsp. corporis (Body louse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Brachyury, putativeImported
Gene namesi
Name:8237656Imported
ORF Names:Phum_PHUM392580Imported
OrganismiPediculus humanus subsp. corporis (Body louse)Imported
Taxonomic identifieri121224 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraParaneopteraPsocodeaPhthirapteraAnopluraPediculidaePediculus
Proteomesi
  • UP000009046 Componenti: Partially assembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi121225.PHUM392580-PA

Family & Domainsi

Phylogenomic databases

InParanoidiE0VR50
KOiK10172

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

E0VR50-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAQSHILSAV EPDGSCGNTS RAREPSEGDL LVQLDDRDLW TRFRSLTNEM
60 70 80 90 100
IVTKNGRRMF PVVKVSVSGL DPAAMYTLLL EFVQVDSHRW KYVNGEWVPG
110 120 130 140 150
GKAEAAPPNP IYIHPESPNF GGHWMKEPVS FAKVKLTNKT NGTGQIMLNS
160 170 180 190 200
LHKYEPRVHL VRVGVEQRRV LTFPFPETQF IAVTAYQNEE VTSLKIKYNP
210 220 230 240 250
FAKAFLDAKE RPESVYQRDY QTYQTQTQYS QYPSTWFNLF PTNSSLYNSS
260 270 280 290 300
LPGCGSSDRY SPQGTAALKS HRSVPYTLPT KESPNPSVGT QTSCNISSNN
310 320 330 340 350
PWTSSGNNNN ITWPVSTLSS STQSFDSLVR TSGSNSHHIH HPSPILPANS
360 370 380 390 400
VLSTLNPVMS MYKTDSGSYE KNFTITTQSN SLSLINYDKS HTCSESFEKY
410 420 430 440 450
YQKTEVPTLV YSNKTPSPIM SNNKDTPSPP PTLDNSGHDS PILTNYSAAS
460 470 480 490 500
IMTDYEVKSK SVPKEQSSTS EMTYWNNHHH HHHHHHHHQQ QQEQQPQPQQ
510 520 530 540 550
VSENTLYSIS YDYGNEEYSN VTPVSGDYQL DMFRNEENNL KDKIQYNESY
560 570 580 590 600
YKTTTDFRII RVEDSDEYDN NKRPEEDEIK IKLKTQEEQD NVEMKENEEK
610
SPRETSWTNL SH
Length:612
Mass (Da):69,735
Last modified:November 2, 2010 - v1
Checksum:i06A3516F2BEC01F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235451 Genomic DNA Translation: EEB15856.1
RefSeqiXP_002428594.1, XM_002428549.1

Genome annotation databases

EnsemblMetazoaiPHUM392580-RA; PHUM392580-PA; PHUM392580
GeneIDi8237656
KEGGiphu:Phum_PHUM392580
VectorBaseiPHUM392580-RA; PHUM392580-PA; PHUM392580

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235451 Genomic DNA Translation: EEB15856.1
RefSeqiXP_002428594.1, XM_002428549.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi121225.PHUM392580-PA

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiPHUM392580-RA; PHUM392580-PA; PHUM392580
GeneIDi8237656
KEGGiphu:Phum_PHUM392580
VectorBaseiPHUM392580-RA; PHUM392580-PA; PHUM392580

Organism-specific databases

CTDi8237656

Phylogenomic databases

InParanoidiE0VR50
KOiK10172

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiE0VR50_PEDHC
AccessioniPrimary (citable) accession number: E0VR50
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: November 7, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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