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Entry version 55 (29 Sep 2021)
Sequence version 1 (05 Oct 2010)
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Protein
Submitted name:

Uncharacterized protein

Gene

SELMODRAFT_107448

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:SELMODRAFT_107448Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSelaginella moellendorffii (Spikemoss)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri88036 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiopsidaSelaginellalesSelaginellaceaeSelaginella
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001514 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
D8S2U1

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
88036.EFJ20989

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini406 – 538BEACH-type PHInterPro annotationAdd BLAST133
Domaini557 – 847BEACHInterPro annotationAdd BLAST291
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati992 – 1024WDPROSITE-ProRule annotationAdd BLAST33
Repeati1049 – 1090WDPROSITE-ProRule annotationAdd BLAST42

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni360 – 397DisorderedSequence analysisAdd BLAST38
Regioni462 – 483DisorderedSequence analysisAdd BLAST22

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi363 – 377Acidic residuesSequence analysisAdd BLAST15
Compositional biasi378 – 393Polar residuesSequence analysisAdd BLAST16
Compositional biasi469 – 483Basic and acidic residuesSequence analysisAdd BLAST15

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1787, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000218_4_2_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
D8S2U1

Identification of Orthologs from Complete Genome Data

More...
OMAi
IVISEIN

Database of Orthologous Groups

More...
OrthoDBi
101142at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd06071, Beach, 1 hit
cd01201, PH_BEACH, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.1540.10, 1 hit
2.130.10.10, 1 hit
2.30.29.30, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000409, BEACH_dom
IPR036372, BEACH_dom_sf
IPR023362, PH-BEACH_dom
IPR011993, PH-like_dom_sf
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR036322, WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02138, Beach, 1 hit
PF14844, PH_BEACH, 1 hit
PF00400, WD40, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01026, Beach, 1 hit
SM00320, WD40, 4 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978, SSF50978, 1 hit
SSF81837, SSF81837, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50197, BEACH, 1 hit
PS51783, PH_BEACH, 1 hit
PS50082, WD_REPEATS_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

D8S2U1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
LYDQVWDLLS AINGIGQGGA STSTAGPTFG QRARGLVESL NLPAAEVAAV
60 70 80 90 100
VTGGLGSVGI NVPSSKPNEK AMKLRGEKFP RLAFRLVLVY LYRAGLEAVL
110 120 130 140 150
LSVQQFLPLV PGFLSSDSDQ NKGQLYLTIW CLLDARSQVE KMDDGTRSHV
160 170 180 190 200
LSQLIEELIE IGKVIGLVDK EKRTEETMKN DPYSFLQQDK VKALVRDDKK
210 220 230 240 250
FLRAAKRKWV SAVETLNAET NDTRSLELRE SKALEEQSLT VLNSIHNSEL
260 270 280 290 300
SRRAAYQLKE DAEEQAVASQ WCLIFRNLTD ERGPWSSTTF PSDTLVWWKL
310 320 330 340 350
DKTEDPLRRR LKLKRNYHFD QELLQPAAST EGVGSQSAPK VLSREKVSFR
360 370 380 390 400
KAASFKLEKE SEEVEDEMQD ANDEFVSNES EAESSSTSEA DGAESKQGAA
410 420 430 440 450
EDEVCHLTLY VLLSVSCVLV SPKRKLAGRL EVTHRSLHFH MEFFIEGTGG
460 470 480 490 500
SMVFDSSGGF ARQNQDTDQT GTRDGDKAPG LGKKQHRTWD IFQVTAIYAT
510 520 530 540 550
RYLLQHTALE IFFADAAPPV FLNFASHRVA KDVALTITSS KHVGSKGKTK
560 570 580 590 600
HQIHYVDRKR AIDLAEKARD CWRRRECSNF DYLMILNTLS GRSYNDLTQY
610 620 630 640 650
PVFPWILSDY SSEALDLSSP SVYRDLAKPV GALDEKRFQV FEERYNNFTD
660 670 680 690 700
PDIPSFHYGS HYSSMGIVLF YLLRLEPFSS FHRTLQGGKF DHADRLFHSI
710 720 730 740 750
QNTYANCLTN TSDVKEIIPE FFYMPEFLVN TNSYYIGVKQ DGQHLNNVIL
760 770 780 790 800
PPWAKGSPEE FIRLNREALE SEHTSENLHR WIDLIFGYKQ RGKPAVEAAN
810 820 830 840 850
IFYYLTYEGT VELETMEDVR QRASVEDQIA NFGQTPIQLF KKKHPKRGPP
860 870 880 890 900
VPLLRPLYYS PASTTLVSTI PSRSLSFGKS DEDHPVLYIG HCDGKIISVT
910 920 930 940 950
SQMVVSSRMW LTPSMPPSGS FTFSSSQDST YGLGSEEWPC HKVRGYFTES
960 970 980 990 1000
FPDSFCFCAL PAISTVYLLS CGHWDNSFKL MSLTDGQTVQ SLCQHKDVVT
1010 1020 1030 1040 1050
CASVAADGSI VVTGSRDTTV MVWETQLSSN RIKRSDSKLA VSDKPRHVLC
1060 1070 1080 1090 1100
GHDDAVTCVV VRTELDLVVS GSEDGTCILY TLRQGRYVRS LVHPSRKSIS
1110 1120 1130 1140 1150
LLVVSPHGLV GLFSNKDLNF HSFSVNGKHL ASAELNGRLS CMELSSCGEF
1160 1170 1180 1190 1200
VVCGGDQGYV TVRKLHSLEL VHRYDAAGSP IVSLCVTPED CFLVGTRDGR
1210
FLIYAVETSP RREKR
Length:1,215
Mass (Da):136,131
Last modified:October 5, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB0C48F122F59F4A6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GL377600 Genomic DNA Translation: EFJ20989.1

NCBI Reference Sequences

More...
RefSeqi
XP_002977651.1, XM_002977605.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
EFJ20989; EFJ20989; SELMODRAFT_107448

Gramene; a comparative resource for plants

More...
Gramenei
EFJ20989; EFJ20989; SELMODRAFT_107448

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
smo:SELMODRAFT_107448

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377600 Genomic DNA Translation: EFJ20989.1
RefSeqiXP_002977651.1, XM_002977605.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi88036.EFJ20989

Proteomic databases

PRIDEiD8S2U1

Genome annotation databases

EnsemblPlantsiEFJ20989; EFJ20989; SELMODRAFT_107448
GrameneiEFJ20989; EFJ20989; SELMODRAFT_107448
KEGGismo:SELMODRAFT_107448

Phylogenomic databases

eggNOGiKOG1787, Eukaryota
HOGENOMiCLU_000218_4_2_1
InParanoidiD8S2U1
OMAiIVISEIN
OrthoDBi101142at2759

Family and domain databases

CDDicd06071, Beach, 1 hit
cd01201, PH_BEACH, 1 hit
Gene3Di1.10.1540.10, 1 hit
2.130.10.10, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR000409, BEACH_dom
IPR036372, BEACH_dom_sf
IPR023362, PH-BEACH_dom
IPR011993, PH-like_dom_sf
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR036322, WD40_repeat_dom_sf
PfamiView protein in Pfam
PF02138, Beach, 1 hit
PF14844, PH_BEACH, 1 hit
PF00400, WD40, 2 hits
SMARTiView protein in SMART
SM01026, Beach, 1 hit
SM00320, WD40, 4 hits
SUPFAMiSSF50978, SSF50978, 1 hit
SSF81837, SSF81837, 1 hit
PROSITEiView protein in PROSITE
PS50197, BEACH, 1 hit
PS51783, PH_BEACH, 1 hit
PS50082, WD_REPEATS_2, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD8S2U1_SELML
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D8S2U1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: September 29, 2021
This is version 55 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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