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Entry version 42 (13 Nov 2019)
Sequence version 1 (10 Aug 2010)
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Protein
Submitted name:

Mitochondrial ATP synthase subunit c

Gene
N/A
Organism
Polytomella sp. Pringsheim 198.80
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processHydrogen ion transportUniRule annotation, Ion transport, Transport
LigandLipid-bindingUniRule annotation

Protein family/group databases

Transport Classification Database

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TCDBi
3.A.2.1.11 the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Mitochondrial ATP synthase subunit cImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPolytomella sp. Pringsheim 198.80Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri37502 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaePolytomellaunclassified Polytomella

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei61 – 87HelicalUniRule annotationAdd BLAST27
Transmembranei99 – 126HelicalUniRule annotationAdd BLAST28

Keywords - Cellular componenti

Membrane

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
D7P7X5

Database of comparative protein structure models

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ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

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PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini63 – 124ATP-synt_CInterPro annotationAdd BLAST62

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ATPase C chain family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
1.20.20.10, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_01396 ATP_synth_c_bact, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000454 ATP_synth_F0_csu
IPR020537 ATP_synth_F0_csu_DDCD_BS
IPR038662 ATP_synth_F0_csu_sf
IPR002379 ATPase_proteolipid_c-like_dom
IPR035921 F/V-ATP_Csub_sf

The PANTHER Classification System

More...
PANTHERi
PTHR10031 PTHR10031, 1 hit

Pfam protein domain database

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Pfami
View protein in Pfam
PF00137 ATP-synt_C, 1 hit

Protein Motif fingerprint database; a protein domain database

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PRINTSi
PR00124 ATPASEC

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF81333 SSF81333, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00605 ATPASE_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

D7P7X5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSVQRLSLGA ARCLSAGVAR VQASQALVAQ KAVAVAPTRA QAAPAEVAQV
60 70 80 90 100
RSMSVLAASK MVGAGCATIA LAGVGAGLGV MFGSLINGAA RNPNIAKQLV
110 120
GYALLGFALT ESIALFSLLV VFLILFA
Length:127
Mass (Da):12,655
Last modified:August 10, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i938DA8BBE4E8E255
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GU075868 mRNA Translation: ADE92942.1

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU075868 mRNA Translation: ADE92942.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

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PDBei

Protein Data Bank RCSB

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RCSB PDBi

Protein Data Bank Japan

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PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
6F36electron microscopy3.70A/B/C/D/E/F/G/H/I/J1-127[»]
6RD4electron microscopy2.90A/B/C/D/E/F/G/H/I/J1-127[»]
6RD7electron microscopy2.73A/B/C/D/E/F/G/H/I/J1-127[»]
6RD8electron microscopy3.08A/B/C/D/E/F/G/H/I/J1-127[»]
6RD9electron microscopy3.00A/B/C/D/E/F/G/H/I/J1-127[»]
6RDBelectron microscopy2.80A/B/C/D/E/F/G/H/I/J1-127[»]
6RDCelectron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RDGelectron microscopy2.90A/B/C/D/E/F/G/H/I/J1-127[»]
6RDHelectron microscopy3.00A/B/C/D/E/F/G/H/I/J1-127[»]
6RDIelectron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RDJelectron microscopy2.90A/B/C/D/E/F/G/H/I/J1-127[»]
6RDKelectron microscopy3.70A/B/C/D/E/F/G/H/I/J1-127[»]
6RDLelectron microscopy3.70A/B/C/D/E/F/G/H/I/J1-127[»]
6RDMelectron microscopy3.44A/B/C/D/E/F/G/H/I/J1-127[»]
6RDNelectron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RDOelectron microscopy3.10A/B/C/D/E/F/G/H/I/J1-127[»]
6RDPelectron microscopy2.80A/B/C/D/E/F/G/H/I/J1-127[»]
6RDQelectron microscopy4.00A/B/C/D/E/F/G/H/I/J1-127[»]
6RDRelectron microscopy4.10A/B/C/D/E/F/G/H/I/J1-127[»]
6RDSelectron microscopy3.80A/B/C/D/E/F/G/H/I/J1-127[»]
6RDTelectron microscopy3.40A/B/C/D/E/F/G/H/I/J1-127[»]
6RDUelectron microscopy3.50A/B/C/D/E/F/G/H/I/J1-127[»]
6RDWelectron microscopy3.80A/B/C/D/E/F/G/H/I/J1-127[»]
6RDXelectron microscopy3.90A/B/C/D/E/F/G/H/I/J1-127[»]
6RDYelectron microscopy3.60A/B/C/D/E/F/G/H/I/J1-127[»]
6RDZelectron microscopy3.50A/B/C/D/E/F/G/H/I/J1-127[»]
6RE0electron microscopy3.60A/B/C/D/E/F/G/H/I/J1-127[»]
6RE1electron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RE2electron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RE3electron microscopy3.30A/B/C/D/E/F/G/H/I/J1-127[»]
6RE4electron microscopy3.00A/B/C/D/E/F/G/H/I/J1-127[»]
6RE5electron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RE6electron microscopy3.40A/B/C/D/E/F/G/H/I/J1-127[»]
6RE7electron microscopy3.10A/B/C/D/E/F/G/H/I/J1-127[»]
6RE8electron microscopy3.80A/B/C/D/E/F/G/H/I/J1-127[»]
6RE9electron microscopy3.90A/B/C/D/E/F/G/H/I/J1-127[»]
6REAelectron microscopy3.60A/B/C/D/E/F/G/H/I/J1-127[»]
6REBelectron microscopy3.20A/B/C/D/E/F/G/H/I/J1-127[»]
6RECelectron microscopy3.30A/B/C/D/E/F/G/H/I/J1-127[»]
6REDelectron microscopy3.00A/B/C/D/E/F/G/H/I/J1-127[»]
6REEelectron microscopy3.10A/B/C/D/E/F/G/H/I/J1-127[»]
6REFelectron microscopy3.30A/B/C/D/E/F/G/H/I/J1-127[»]
6REPelectron microscopy3.10A/B/C/D/E/F/G/H/I/J1-127[»]
6RERelectron microscopy2.90A/B/C/D/E/F/G/H/I/J1-127[»]
6RESelectron microscopy4.30A/B/C/D/E/F/G/H/I/J1-127[»]
6RETelectron microscopy4.30A/B/C/D/E/F/G/H/I/J1-127[»]
6REUelectron microscopy4.20A/B/C/D/E/F/G/H/I/J1-127[»]
SMRiD7P7X5
ModBaseiSearch...
PDBe-KBiSearch...

Protein family/group databases

TCDBi3.A.2.1.11 the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily

Family and domain databases

Gene3Di1.20.20.10, 1 hit
HAMAPiMF_01396 ATP_synth_c_bact, 1 hit
InterProiView protein in InterPro
IPR000454 ATP_synth_F0_csu
IPR020537 ATP_synth_F0_csu_DDCD_BS
IPR038662 ATP_synth_F0_csu_sf
IPR002379 ATPase_proteolipid_c-like_dom
IPR035921 F/V-ATP_Csub_sf
PANTHERiPTHR10031 PTHR10031, 1 hit
PfamiView protein in Pfam
PF00137 ATP-synt_C, 1 hit
PRINTSiPR00124 ATPASEC
SUPFAMiSSF81333 SSF81333, 1 hit
PROSITEiView protein in PROSITE
PS00605 ATPASE_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD7P7X5_9CHLO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D7P7X5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 13, 2019
This is version 42 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources
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