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Protein
Submitted name:

Uncharacterized protein

Gene

ARALYDRAFT_902401

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_902401Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi59689.scaffold_401902.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini210 – 357YDGInterPro annotationAdd BLAST148
Domaini437 – 495Pre-SETInterPro annotationAdd BLAST59
Domaini498 – 641SETInterPro annotationAdd BLAST144

Phylogenomic databases

KOiK11420
OrthoDBiEOG093603OW

Family and domain databases

Gene3Di2.30.280.10, 1 hit
InterProiView protein in InterPro
IPR025794 Hist-Lys_N-MeTrfase_plant
IPR007728 Pre-SET_dom
IPR015947 PUA-like_sf
IPR001214 SET_dom
IPR036987 SRA-YDG_sf
IPR003105 SRA_YDG
PfamiView protein in Pfam
PF05033 Pre-SET, 1 hit
PF02182 SAD_SRA, 1 hit
PF00856 SET, 1 hit
SMARTiView protein in SMART
SM00468 PreSET, 1 hit
SM00317 SET, 1 hit
SM00466 SRA, 1 hit
SUPFAMiSSF88697 SSF88697, 1 hit
PROSITEiView protein in PROSITE
PS50867 PRE_SET, 1 hit
PS51575 SAM_MT43_SUVAR39_2, 1 hit
PS50280 SET, 1 hit
PS51015 YDG, 1 hit

Sequencei

Sequence statusi: Complete.

D7LFS4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTVVPFPDL NLMPASQSST AGTTAGDTVV TGKLEVKAEP VEECQTPPSS
60 70 80 90 100
FSDQSASTDL IAEFIRISKL FRSAFKPHQI EGLDGVSVYG LDSGAIVTVP
110 120 130 140 150
EEENRELIKP PPGFGDNRVS TVVVSPPPTK FERPRELARI AILGHDQRKE
160 170 180 190 200
LRQVMKRTRM TYESLRIHLM AESMKNPVLG QGRRRRSDMA AAYIMRDRGL
210 220 230 240 250
WLNYDKHIVG PISGVEIGDI FFYRMELCVV GLHGQTQAGI DCLTAERSAT
260 270 280 290 300
GEPIATSIVV SGGYEDDEDT GDVLVYTGHG GQDKQHKQCD NQRLVGGNLG
310 320 330 340 350
MERSMHYGIE VRVIRGIKYE NSISSKVYVY DGLYKIVDCW FAVGKSGFGV
360 370 380 390 400
FKFRLVRMDG QPMMGSAVMR FAQTLRSKPL MVRPTGYVSF DLSNKKENVP
410 420 430 440 450
VFLYNDVDGD QEPRHYEYIA KSVFPPGIFG QGGISRTGCD CKLSCTDDCL
460 470 480 490 500
CARKNGGEFA YDDNGHLLRG KDVVFECGEL CTCGPNCKSR VTQKGLRNRL
510 520 530 540 550
EVFRSKETGW GVRTLDLIEA GAFICEYAGV VVTRHQAEIL SMNGDVMVYP
560 570 580 590 600
GRFTDKWRNW GDLSQVYPDS VRPDYPSLPP LDFAMDVSRM RNVACYISHS
610 620 630 640 650
KDPNVMVQFV LYDHNHLMFP RVMLFALENI SPLAELSLDY GLADEVNGKL

AICN
Length:654
Mass (Da):72,793
Last modified:August 10, 2010 - v1
Checksum:i81B786192BF757FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348716 Genomic DNA Translation: EFH55704.1
RefSeqiXP_002879445.1, XM_002879399.1

Genome annotation databases

EnsemblPlantsiscaffold_401902.1; scaffold_401902.1; scaffold_401902.1
GeneIDi9317341
Grameneiscaffold_401902.1; scaffold_401902.1; scaffold_401902.1
KEGGialy:ARALYDRAFT_902401

Similar proteinsi

Entry informationi

Entry nameiD7LFS4_ARALL
AccessioniPrimary (citable) accession number: D7LFS4
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: December 20, 2017
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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