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Protein
Submitted name:

Uncharacterized protein

Gene

ARALYDRAFT_902126

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_902126Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Interactioni

Protein-protein interaction databases

STRINGi59689.scaffold_401627.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 87TCPInterPro annotationAdd BLAST59

Phylogenomic databases

OrthoDBiEOG09360NY5

Family and domain databases

InterProiView protein in InterPro
IPR017887 TF_TCP_subgr
IPR005333 Transcription_factor_TCP
PfamiView protein in Pfam
PF03634 TCP, 1 hit
PROSITEiView protein in PROSITE
PS51369 TCP, 1 hit

Sequencei

Sequence statusi: Complete.

D7LCY3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGLKGYSVGE GGGEIVEVQG GHIIRATGRK DRHSKVFTSK GPRDRRVRLS
60 70 80 90 100
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KTAIDKLEIG ETTTTIRQEP
110 120 130 140 150
VNTKPESPNL VFQRENNDQT QQTQFVAANL DPEDAMKTFF PATTTTSGGG
160 170 180 190 200
TNMNFQNYPH HDDDNMVSRT TTTPPNLSQD LGLSLHPFQG NNNTVVVPET
210 220 230 240 250
NNFTTNHFDT FGRISGWNHP DLTMTSSSSS EHQQQEQEER SNGGFMVNHH
260 270 280 290 300
HHHQHQPSMM TLLNSQQQQV FLGGHQQQQQ RGTLQSSLFP HSFRSWDHHQ
310 320 330 340 350
TVSDHHHQNQ ASSMFASSSQ FGSHGMMMMQ GLSFPNTTRL LHGEESTQPN
360
SSSSPPNSHL
Length:360
Mass (Da):40,345
Last modified:August 10, 2010 - v1
Checksum:iED99A3EB825C40C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348716 Genomic DNA Translation: EFH57412.1
RefSeqiXP_002881153.1, XM_002881107.1

Genome annotation databases

EnsemblPlantsiscaffold_401627.1; scaffold_401627.1; scaffold_401627.1
GeneIDi9317220
Grameneiscaffold_401627.1; scaffold_401627.1; scaffold_401627.1
KEGGialy:ARALYDRAFT_902126

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348716 Genomic DNA Translation: EFH57412.1
RefSeqiXP_002881153.1, XM_002881107.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59689.scaffold_401627.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiscaffold_401627.1; scaffold_401627.1; scaffold_401627.1
GeneIDi9317220
Grameneiscaffold_401627.1; scaffold_401627.1; scaffold_401627.1
KEGGialy:ARALYDRAFT_902126

Phylogenomic databases

OrthoDBiEOG09360NY5

Family and domain databases

InterProiView protein in InterPro
IPR017887 TF_TCP_subgr
IPR005333 Transcription_factor_TCP
PfamiView protein in Pfam
PF03634 TCP, 1 hit
PROSITEiView protein in PROSITE
PS51369 TCP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD7LCY3_ARALL
AccessioniPrimary (citable) accession number: D7LCY3
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: April 25, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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