Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pectate disaccharide-lyase

Gene

Ndas_1008

Organism
Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) (Actinomadura dassonvillei)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLyaseImported

Enzyme and pathway databases

BioCyciNDAS446468:G1GLP-1013-MONOMER

Protein family/group databases

CAZyiCBM35 Carbohydrate-Binding Module Family 35
PL9 Polysaccharide Lyase Family 9

Names & Taxonomyi

Protein namesi
Submitted name:
Pectate disaccharide-lyaseImported (EC:4.2.2.9Imported)
Gene namesi
Ordered Locus Names:Ndas_1008Imported
OrganismiNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) (Actinomadura dassonvillei)Imported
Taxonomic identifieri446468 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesNocardiopsaceaeNocardiopsis
Proteomesi
  • UP000002219 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500309264328 – 540Sequence analysisAdd BLAST513

Interactioni

Protein-protein interaction databases

STRINGi446468.Ndas_1008

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 154CBM6InterPro annotationAdd BLAST125

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106WHP Bacteria
ENOG410XUYX LUCA
HOGENOMiHOG000217148
OMAiNASYWHV
OrthoDBiPOG091H0FJA

Family and domain databases

Gene3Di2.160.20.10, 1 hit
2.60.120.260, 1 hit
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR008979 Galactose-bd-like_sf
IPR006626 PbH1
IPR012334 Pectin_lyas_fold
IPR011050 Pectin_lyase_fold/virulence
PfamiView protein in Pfam
PF16990 CBM_35, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 1 hit
SM00710 PbH1, 4 hits
SUPFAMiSSF49785 SSF49785, 1 hit
SSF51126 SSF51126, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 1 hit

Sequencei

Sequence statusi: Complete.

D7B160-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTRPALACA ALLAGTLVTL SGTAAHAATT RYEAEGTSAS CNGSIETEWP
60 70 80 90 100
GYSGDGFCDT ENEEGAHVQF SVNAPASGTA TLTVRFANGT SSARPADVLV
110 120 130 140 150
NGSRTASVSF EGTGDWDAWT TKTLTVQLAE GANTIRFDPT GSQGMPNVDY
160 170 180 190 200
LDVETSGGGD DGGGDDGGGD DGGGDDGNPP TSDALYVAPG GSAGADGTES
210 220 230 240 250
DPTTLTSAID RIEPGGTIHM RGGTYSFSDT VTIPLGEDGT SGNRTELSAY
260 270 280 290 300
PGETPVLDFS AQSEDSANRG LALEASYWHV EGIVVEHAGD NGIFVSGSHN
310 320 330 340 350
VIERTVTRFN RDTGLQLSRR VSSTPESDWP AHNLILSAES HDNADSDGED
360 370 380 390 400
ADGFAAKLTS GPGNVFRYAV AHNNIDDGWD LYTKDDTGPI GTVTIEDSLA
410 420 430 440 450
YENGILSDGS QAGNGDRNGF KLGGEDIGVD HVITGNIAYD NGKHGFTYNS
460 470 480 490 500
NPGSMTVSDN VSIGNEERNF NFDDGSSVFR GNTSCDSGSN DRIIGNADSS
510 520 530 540
NQFWSGSNGS RCSSYDGGLD WSYAADGTLV VTFGGQRVTP
Length:540
Mass (Da):55,897
Last modified:August 10, 2010 - v1
Checksum:i9ED252B29DE3F318
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002040 Genomic DNA Translation: ADH66451.1
RefSeqiWP_013152058.1, NC_014210.1

Genome annotation databases

EnsemblBacteriaiADH66451; ADH66451; Ndas_1008
KEGGinda:Ndas_1008

Similar proteinsi

Entry informationi

Entry nameiD7B160_NOCDD
AccessioniPrimary (citable) accession number: D7B160
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: February 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health