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Protein

Endo-alpha-(1->5)-L-arabinanase

Gene

Abn AF25

Organism
Bacillus subtilis
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->5)-alpha-arabinofuranosidic linkages in (1->5)-arabinans.UniRule annotation

Pathwayi: L-arabinan degradation

This protein is involved in the pathway L-arabinan degradation, which is part of Glycan metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway L-arabinan degradation and in Glycan metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei46Proton acceptorUniRule annotation1
Binding sitei46SubstrateUniRule annotation1
Binding sitei127Substrate; via amide nitrogenUniRule annotation1
Active sitei217Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

UniPathwayiUPA00667

Protein family/group databases

CAZyiGH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-alpha-(1->5)-L-arabinanaseUniRule annotation (EC:3.2.1.99UniRule annotation)
Gene namesi
Name:Abn AF25Imported
OrganismiBacillus subtilisImported
Taxonomic identifieri1423 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500308768135 – 325Endo-alpha-(1->5)-L-arabinanaseSequence analysisAdd BLAST291

Structurei

3D structure databases

ProteinModelPortaliD6RV88
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni162 – 165Substrate bindingUniRule annotation4
Regioni182 – 184Substrate bindingUniRule annotation3

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR016840 Glyco_hydro_43_endo_a_Ara-ase
IPR023296 Glyco_hydro_beta-prop_sf
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PIRSFiPIRSF026534 Endo_alpha-L-arabinosidase, 1 hit
SUPFAMiSSF75005 SSF75005, 1 hit

Sequencei

Sequence statusi: Complete.

D6RV88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNMKKKAFS GLLRFSCAAL TAGAVMLSAL PASAAFWGAS NELLHDPTMA
60 70 80 90 100
KEGNTWYAFG TGLAEENGLR VLKADSNGVW RVQRSIFTSP LSWWKQYVPN
110 120 130 140 150
YERNQWAPDV KYYNGKYWLY YSVSSFGSNT SLIGLASTTS LSSGSWKDEG
160 170 180 190 200
LVTRSTSANN YNAIDPELTI DKDGNPWLAF GSFWSGIKLT KLNKDTMKPT
210 220 230 240 250
GSLYSIAARP NNGGALEAPT LTYNNGYYYL MVSFDKCCEG VNSTYKIAYG
260 270 280 290 300
RSKNITGPYV DKNGKSMMDG GGTILDAGNE QWKGPGGQDI VNGNILVRHA
310 320
YDAKDNGKPK MLINDLNWSS GWPSY
Length:325
Mass (Da):35,708
Last modified:August 10, 2010 - v1
Checksum:iC275E682FDE53CC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB561864 Genomic DNA Translation: BAJ07984.1

Similar proteinsi

Entry informationi

Entry nameiD6RV88_BACIU
AccessioniPrimary (citable) accession number: D6RV88
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 22, 2017
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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