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Protein
Submitted name:

PDZ and LIM domain protein 7

Gene

PDLIM7

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
PDZ and LIM domain protein 7Imported
Gene namesi
Name:PDLIM7Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 5

Organism-specific databases

EuPathDBiHostDB:ENSG00000196923.13
HGNCiHGNC:22958 PDLIM7

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000196923

PTM / Processingi

Proteomic databases

EPDiD6RH06
MaxQBiD6RH06
PeptideAtlasiD6RH06
PRIDEiD6RH06

Expressioni

Gene expression databases

BgeeiENSG00000196923 Expressed in 188 organ(s), highest expression level in thoracic aorta
ExpressionAtlasiD6RH06 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliD6RH06
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 85PDZInterPro annotationAdd BLAST77

Phylogenomic databases

eggNOGiKOG1703 Eukaryota
ENOG410XRD4 LUCA
GeneTreeiENSGT00760000118910
HOGENOMiHOG000290705

Family and domain databases

InterProiView protein in InterPro
IPR001478 PDZ
IPR036034 PDZ_sf
PfamiView protein in Pfam
PF00595 PDZ, 1 hit
SMARTiView protein in SMART
SM00228 PDZ, 1 hit
SUPFAMiSSF50156 SSF50156, 1 hit
PROSITEiView protein in PROSITE
PS50106 PDZ, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

D6RH06-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDSFKVVLEG PAPWGFRLQG GKDFNVPLSI SRLTPGGKAA QAGVAVGDWV
60 70 80 90 100
LSIDGENAGS LTHIEAQNKI RACGERLSLG LSRAQPVQSK PQKASAPAAD
110 120 130 140 150
PPRYTFAPSV SLNKTARPFG APPPADSAPQ QNGQPLRPLV PDASKQRLME
160 170 180 190 200
NTEDWRPRPG TGQSRSFRIL AHLTGTEFMQ DPDEEHLKKS RWLPGMRGTP
210 220 230 240 250
GAASEAGALP RLPARDRTPA NWTLLGEAAL PIPTPVGPGI QLGSFHAPSH
260 270 280
LPWGQQDPGW GVGPCQEAQP CRALNGRSCS QVPRTEA
Length:287
Mass (Da):30,562
Last modified:July 13, 2010 - v1
Checksum:i321C51009A1A1B23
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9NR12PDLI7_HUMAN
PDZ and LIM domain protein 7
PDLIM7 ENIGMA
457Annotation score:
D6RAN1D6RAN1_HUMAN
PDZ and LIM domain protein 7
PDLIM7
90Annotation score:
D6RF83D6RF83_HUMAN
PDZ and LIM domain protein 7
PDLIM7
173Annotation score:
H0Y8W6H0Y8W6_HUMAN
PDZ and LIM domain protein 7
PDLIM7
120Annotation score:
H7BYK4H7BYK4_HUMAN
PDZ and LIM domain protein 7
PDLIM7
195Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei287Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC145098 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000505074; ENSP00000426213; ENSG00000196923
UCSCiuc063kex.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC145098 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliD6RH06
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

EPDiD6RH06
MaxQBiD6RH06
PeptideAtlasiD6RH06
PRIDEiD6RH06

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000505074; ENSP00000426213; ENSG00000196923
UCSCiuc063kex.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000196923.13
HGNCiHGNC:22958 PDLIM7
OpenTargetsiENSG00000196923
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1703 Eukaryota
ENOG410XRD4 LUCA
GeneTreeiENSGT00760000118910
HOGENOMiHOG000290705

Miscellaneous databases

ChiTaRSiPDLIM7 human

Gene expression databases

BgeeiENSG00000196923 Expressed in 188 organ(s), highest expression level in thoracic aorta
ExpressionAtlasiD6RH06 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR001478 PDZ
IPR036034 PDZ_sf
PfamiView protein in Pfam
PF00595 PDZ, 1 hit
SMARTiView protein in SMART
SM00228 PDZ, 1 hit
SUPFAMiSSF50156 SSF50156, 1 hit
PROSITEiView protein in PROSITE
PS50106 PDZ, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD6RH06_HUMAN
AccessioniPrimary (citable) accession number: D6RH06
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: September 12, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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