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Protein
Submitted name:

Claudin domain-containing protein 1

Gene

CLDND1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Claudin domain-containing protein 1Imported
Gene namesi
Name:CLDND1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiHostDB:ENSG00000080822.16
HGNCiHGNC:1322 CLDND1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 27HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080822

PTM / Processingi

Proteomic databases

MaxQBiD6RD48
PeptideAtlasiD6RD48
PRIDEiD6RD48

Expressioni

Gene expression databases

BgeeiENSG00000080822 Expressed in 231 organ(s), highest expression level in corpus callosum
ExpressionAtlasiD6RD48 baseline and differential

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IFQW Eukaryota
ENOG4110MPF LUCA
GeneTreeiENSGT00390000002596

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 19 potential isoforms that are computationally mapped.Show allAlign All

D6RD48-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDNRFATAFV IACVLSLIST IYMAASIGTD FWYEYRSPVQ ENSSDLNKSI
60 70 80
WDEFISDEAD EKTYNDALFR YNGTVGLWRR CITIPKNMH
Length:89
Mass (Da):10,329
Last modified:July 13, 2010 - v1
Checksum:iA4F4F2F4ABE6D649
GO

Computationally mapped potential isoform sequencesi

There are 19 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9NY35CLDN1_HUMAN
Claudin domain-containing protein 1
CLDND1 C3orf4, HSPC174, PSEC0054, UNQ2511/PRO6000
253Annotation score:
H0YA53H0YA53_HUMAN
Claudin domain-containing protein 1
CLDND1
72Annotation score:
A0A0R4J2F2A0A0R4J2F2_HUMAN
Claudin domain-containing protein 1
CLDND1
276Annotation score:
D6R9S8D6R9S8_HUMAN
Claudin domain-containing protein 1
CLDND1
213Annotation score:
D6RB31D6RB31_HUMAN
Claudin domain-containing protein 1
CLDND1
100Annotation score:
D6RC11D6RC11_HUMAN
Claudin domain-containing protein 1
CLDND1
210Annotation score:
D6RHU6D6RHU6_HUMAN
Claudin domain-containing protein 1
CLDND1
172Annotation score:
H0Y8T9H0Y8T9_HUMAN
Claudin domain-containing protein 1
CLDND1
155Annotation score:
D6RCE6D6RCE6_HUMAN
Claudin domain-containing protein 1
CLDND1
223Annotation score:
D6RCP3D6RCP3_HUMAN
Claudin domain-containing protein 1
CLDND1
121Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei89Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021660 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000506575; ENSP00000427042; ENSG00000080822
UCSCiuc062lwc.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021660 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiD6RD48
PeptideAtlasiD6RD48
PRIDEiD6RD48

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000506575; ENSP00000427042; ENSG00000080822
UCSCiuc062lwc.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000080822.16
HGNCiHGNC:1322 CLDND1
OpenTargetsiENSG00000080822
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IFQW Eukaryota
ENOG4110MPF LUCA
GeneTreeiENSGT00390000002596

Miscellaneous databases

ChiTaRSiCLDND1 human

Gene expression databases

BgeeiENSG00000080822 Expressed in 231 organ(s), highest expression level in corpus callosum
ExpressionAtlasiD6RD48 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiD6RD48_HUMAN
AccessioniPrimary (citable) accession number: D6RD48
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: September 12, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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