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Protein
Submitted name:

Coatomer subunit beta'

Gene

COPB2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

SignaLinkiD6RBZ7

Names & Taxonomyi

Protein namesi
Submitted name:
Coatomer subunit beta'Imported
Gene namesi
Name:COPB2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiHostDB:ENSG00000184432.9
HGNCiHGNC:2232 COPB2

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000184432

PTM / Processingi

Proteomic databases

MaxQBiD6RBZ7
PeptideAtlasiD6RBZ7
PRIDEiD6RBZ7

Expressioni

Gene expression databases

BgeeiENSG00000184432 Expressed in 234 organ(s), highest expression level in parotid gland
ExpressionAtlasiD6RBZ7 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliD6RBZ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 77WD_REPEATS_REGIONInterPro annotationAdd BLAST77

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0276 Eukaryota
ENOG410XNNY LUCA
GeneTreeiENSGT00900000141083

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50294 WD_REPEATS_REGION, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

D6RBZ7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLASLYNGSV CVWNHETQTL VKTFEVCDLP VRAAKFVARK NWVVTGADDM
60 70
QIRVFNYNTL ERVHMFEAHS DYIRCIA
Length:77
Mass (Da):8,924
Last modified:July 13, 2010 - v1
Checksum:i43B9579500D7B98C
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P35606COPB2_HUMAN
Coatomer subunit beta'
COPB2
906Annotation score:
H0Y938H0Y938_HUMAN
Coatomer subunit beta'
COPB2
177Annotation score:
D6RBT6D6RBT6_HUMAN
Coatomer subunit beta'
COPB2
111Annotation score:
D6R997D6R997_HUMAN
Coatomer subunit beta'
COPB2
152Annotation score:
D6RBG7D6RBG7_HUMAN
Coatomer subunit beta'
COPB2
89Annotation score:
D6RCL6D6RCL6_HUMAN
Coatomer subunit beta'
COPB2
86Annotation score:
H0YAC7H0YAC7_HUMAN
Coatomer subunit beta'
COPB2
118Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei77Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024933 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000514508; ENSP00000422469; ENSG00000184432
UCSCiuc062oir.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024933 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliD6RBZ7
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiD6RBZ7
PeptideAtlasiD6RBZ7
PRIDEiD6RBZ7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000514508; ENSP00000422469; ENSG00000184432
UCSCiuc062oir.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000184432.9
HGNCiHGNC:2232 COPB2
OpenTargetsiENSG00000184432
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0276 Eukaryota
ENOG410XNNY LUCA
GeneTreeiENSGT00900000141083

Enzyme and pathway databases

SignaLinkiD6RBZ7

Miscellaneous databases

ChiTaRSiCOPB2 human

Gene expression databases

BgeeiENSG00000184432 Expressed in 234 organ(s), highest expression level in parotid gland
ExpressionAtlasiD6RBZ7 baseline and differential

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD6RBZ7_HUMAN
AccessioniPrimary (citable) accession number: D6RBZ7
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: September 12, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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