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Protein
Submitted name:

Cellular nucleic acid-binding protein

Gene

CNBP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid-binding proteinImported
Gene namesi
Name:CNBPImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiHostDB:ENSG00000169714.16
HGNCiHGNC:13164 CNBP

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000169714

PTM / Processingi

Proteomic databases

PeptideAtlasiD6RAT4
PRIDEiD6RAT4

Expressioni

Gene expression databases

BgeeiENSG00000169714 Expressed in 230 organ(s), highest expression level in skeletal muscle tissue of rectus abdominis
ExpressionAtlasiD6RAT4 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliD6RAT4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini48 – 61CCHC-typeInterPro annotationAdd BLAST14

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00510000047065

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00098 zf-CCHC, 2 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 2 hits

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D6RAT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFQFV SSSLPDICYR
60 70 80 90 100
CGESGHLAKD CDLQEDVLAC FFSLLLKPAI TAVEVATLPR TARSPRESES
110
NAATTVANQA IWL
Length:113
Mass (Da):12,199
Last modified:October 5, 2016 - v8
Checksum:iC79F0F231721F3E0
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P62633CNBP_HUMAN
Cellular nucleic acid-binding prote...
CNBP RNF163, ZNF9
177Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei113Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC108673 Genomic DNA No translation available.
AC135587 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000512338; ENSP00000424787; ENSG00000169714
UCSCiuc062nqc.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC108673 Genomic DNA No translation available.
AC135587 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliD6RAT4
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiD6RAT4
PRIDEiD6RAT4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000512338; ENSP00000424787; ENSG00000169714
UCSCiuc062nqc.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000169714.16
HGNCiHGNC:13164 CNBP
OpenTargetsiENSG00000169714
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00510000047065

Miscellaneous databases

ChiTaRSiCNBP human

Gene expression databases

BgeeiENSG00000169714 Expressed in 230 organ(s), highest expression level in skeletal muscle tissue of rectus abdominis
ExpressionAtlasiD6RAT4 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00098 zf-CCHC, 2 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD6RAT4_HUMAN
AccessioniPrimary (citable) accession number: D6RAT4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: October 5, 2016
Last modified: September 12, 2018
This is version 52 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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