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Protein
Submitted name:

SUPpressor

Gene

sup-26

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • mRNA 3'-UTR binding Source: WormBase

GO - Biological processi

  • negative regulation of translation Source: WormBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SUPpressorImported
Gene namesi
Name:sup-26Imported
ORF Names:CELE_R10E4.2Imported, R10E4.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiR10E4.2q ; CE44636 ; WBGene00006331 ; sup-26

Subcellular locationi

PTM / Processingi

Proteomic databases

EPDiD5MCR3
PaxDbiD5MCR3

Expressioni

Gene expression databases

BgeeiWBGene00006331 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

STRINGi6239.R10E4.2q

Structurei

3D structure databases

ProteinModelPortaliD5MCR3
SMRiD5MCR3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini148 – 226RRMInterPro annotationAdd BLAST79
Domaini229 – 311RRMInterPro annotationAdd BLAST83

Phylogenomic databases

eggNOGiKOG4733 Eukaryota
ENOG410XRB5 LUCA
GeneTreeiENSGT00760000118913
InParanoidiD5MCR3
OrthoDBiEOG091G0FXS

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 16 potential isoforms that are computationally mapped.Show allAlign All

D5MCR3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPPTAQNSQQ PYPRSDKAGG HLLHYSSSSH QHQNHQHYHS SSSNQQFNRP
60 70 80 90 100
PPPPHNSQHH HHHNNSRMNA SSAPQQQQQQ QQPQQGQAPQ QQQQGPPQHQ
110 120 130 140 150
YQQQRPFHGR VQNHMRGSGP FGNSNGYGRY TAPRGDQQHH DSTPLSSTNL
160 170 180 190 200
YIRGLMPNTN DDLLREMCSK YGNIASTKAI MDKATNNCKG YGFVDFESPQ
210 220 230 240 250
AAAAAVDGLN TEGVQAQMAK LQQQEQDPTN LYIANLPLDF TEQMLETELN
260 270 280 290 300
KFGMVISTRI LRTPDNQSRG VGFARMDSKE KCEVIISALN GGRFDTMSKE
310 320 330 340 350
GPALLIKQAD TGRKSKHSMN NPEMLQRMQY PQVYQSYYGY HPAAVYQQHY
360 370 380 390 400
DVNSLASQMG GMHVGGGNPQ ANGGGDMYGA HMYGQNAGGQ GGQGVGQGGQ
410 420 430 440 450
ADESTINGQD NVFTPLLLSS LNLFSLSILS NQSSLQKKTQ CAAARAAINT
460 470
HVHIVSPLPD PQNLLLFLNP KTIVPF
Length:476
Mass (Da):52,411
Last modified:June 15, 2010 - v1
Checksum:iB07570D301AA6CE9
GO

Computationally mapped potential isoform sequencesi

There are 16 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q7JMB8Q7JMB8_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
357Annotation score:
Q21900Q21900_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
409Annotation score:
D5MCR4D5MCR4_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
424Annotation score:
D5MCQ1D5MCQ1_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
354Annotation score:
D5MCQ5D5MCQ5_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
464Annotation score:
D5MCQ2D5MCQ2_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
380Annotation score:
D5MCQ7D5MCQ7_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
412Annotation score:
D5MCQ8D5MCQ8_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
374Annotation score:
D5MCQ6D5MCQ6_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
438Annotation score:
D5MCQ4D5MCQ4_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
316Annotation score:
There are more potential isoformsShow all

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CBK55601.1
RefSeqiNP_001254892.1, NM_001267963.1
UniGeneiCel.23099

Genome annotation databases

EnsemblMetazoaiR10E4.2q; R10E4.2q; WBGene00006331
GeneIDi175551
KEGGicel:CELE_R10E4.2

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CBK55601.1
RefSeqiNP_001254892.1, NM_001267963.1
UniGeneiCel.23099

3D structure databases

ProteinModelPortaliD5MCR3
SMRiD5MCR3
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.R10E4.2q

Proteomic databases

EPDiD5MCR3
PaxDbiD5MCR3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR10E4.2q; R10E4.2q; WBGene00006331
GeneIDi175551
KEGGicel:CELE_R10E4.2

Organism-specific databases

CTDi175551
WormBaseiR10E4.2q ; CE44636 ; WBGene00006331 ; sup-26

Phylogenomic databases

eggNOGiKOG4733 Eukaryota
ENOG410XRB5 LUCA
GeneTreeiENSGT00760000118913
InParanoidiD5MCR3
OrthoDBiEOG091G0FXS

Gene expression databases

BgeeiWBGene00006331 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD5MCR3_CAEEL
AccessioniPrimary (citable) accession number: D5MCR3
Entry historyiIntegrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 10, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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