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Protein
Submitted name:

SUPpressor

Gene

sup-26

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • mRNA 3'-UTR binding Source: WormBase

GO - Biological processi

  • negative regulation of translation Source: WormBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SUPpressorImported
Gene namesi
Name:sup-26Imported
ORF Names:CELE_R10E4.2Imported, R10E4.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiR10E4.2l ; CE44632 ; WBGene00006331 ; sup-26

Subcellular locationi

PTM / Processingi

Proteomic databases

PeptideAtlasiD5MCQ5

Expressioni

Gene expression databases

BgeeiWBGene00006331 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Structurei

3D structure databases

ProteinModelPortaliD5MCQ5
SMRiD5MCQ5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini107 – 185RRMInterPro annotationAdd BLAST79
Domaini188 – 270RRMInterPro annotationAdd BLAST83

Phylogenomic databases

GeneTreeiENSGT00760000118913
OMAiYGMVIST

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 16 potential isoforms that are computationally mapped.Show allAlign All

D5MCQ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNASSAPQQQ QQQQQPQQGQ APQQQQQGPP QHQYQQQRPF HGRVQNHMRG
60 70 80 90 100
SGPFGNSNGY GRYTAPRGDQ QHHDSTPLSS VSSRRVPLPP TSQHRASSNF
110 120 130 140 150
NTTPSSTNLY IRGLMPNTND DLLREMCSKY GNIASTKAIM DKATNNCKGY
160 170 180 190 200
GFVDFESPQA AAAAVDGLNT EGVQAQMAKL QQQEQDPTNL YIANLPLDFT
210 220 230 240 250
EQMLETELNK FGMVISTRIL RTPDNQSRGV GFARMDSKEK CEVIISALNG
260 270 280 290 300
GRFDTMSKEG PALLIKQADT GRKSKVGSTS RHPSFQQFSS LGGPTAFLNG
310 320 330 340 350
QHSMNNPEML QRMQYPQVYQ SYYGYHPAAV YQQHYDVNSL ASQMGGMHVG
360 370 380 390 400
GGNPQANGGG DMYGAHMYGQ NAGGQGGQGV GQGGQVFPAD ESTINGQDNV
410 420 430 440 450
FTPLLLSSLN LFSLSILSNQ SSLQKKTQCA AARAAINTHV HIVSPLPDPQ
460
NLLLFLNPKT IVPF
Length:464
Mass (Da):50,520
Last modified:June 15, 2010 - v1
Checksum:i91D71A54F3679F40
GO

Computationally mapped potential isoform sequencesi

There are 16 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q7JMB8Q7JMB8_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
357Annotation score:
Q21900Q21900_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
409Annotation score:
D5MCR3D5MCR3_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
476Annotation score:
D5MCR4D5MCR4_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
424Annotation score:
D5MCQ1D5MCQ1_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
354Annotation score:
D5MCQ2D5MCQ2_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
380Annotation score:
D5MCQ7D5MCQ7_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
412Annotation score:
D5MCQ8D5MCQ8_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
374Annotation score:
D5MCQ6D5MCQ6_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
438Annotation score:
D5MCQ4D5MCQ4_CAEEL
SUPpressor
sup-26 CELE_R10E4.2, R10E4.2
316Annotation score:
There are more potential isoformsShow all

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CBK55593.1
RefSeqiNP_001254897.1, NM_001267968.1
UniGeneiCel.23099

Genome annotation databases

EnsemblMetazoaiR10E4.2l.1; R10E4.2l.1; WBGene00006331
R10E4.2l.2; R10E4.2l.2; WBGene00006331
GeneIDi175551

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CBK55593.1
RefSeqiNP_001254897.1, NM_001267968.1
UniGeneiCel.23099

3D structure databases

ProteinModelPortaliD5MCQ5
SMRiD5MCQ5
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiD5MCQ5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR10E4.2l.1; R10E4.2l.1; WBGene00006331
R10E4.2l.2; R10E4.2l.2; WBGene00006331
GeneIDi175551

Organism-specific databases

CTDi175551
WormBaseiR10E4.2l ; CE44632 ; WBGene00006331 ; sup-26

Phylogenomic databases

GeneTreeiENSGT00760000118913
OMAiYGMVIST

Gene expression databases

BgeeiWBGene00006331 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD5MCQ5_CAEEL
AccessioniPrimary (citable) accession number: D5MCQ5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 10, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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