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Protein
Submitted name:

Beta-agarase

Gene

Caka_1253

Organism
Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciCAKA583355:G1GHV-1244-MONOMER

Protein family/group databases

CAZyiCBM6 Carbohydrate-Binding Module Family 6
GH86 Glycoside Hydrolase Family 86

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-agaraseImported (EC:3.2.1.81Imported)
Gene namesi
Ordered Locus Names:Caka_1253Imported
OrganismiCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24)Imported
Taxonomic identifieri583355 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaePuniceicoccalesPuniceicoccaceaeCoraliomargarita
Proteomesi
  • UP000000925 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500307150221 – 1303Sequence analysisAdd BLAST1283

Interactioni

Protein-protein interaction databases

STRINGi583355.Caka_1253

Structurei

3D structure databases

ProteinModelPortaliD5EIK7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini622 – 765CBM6InterPro annotationAdd BLAST144

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105NU7 Bacteria
ENOG4111K78 LUCA
OrthoDBiPOG091H03M1

Family and domain databases

Gene3Di2.60.120.260, 1 hit
2.60.40.1180, 2 hits
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR013320 ConA-like_dom_sf
IPR008979 Galactose-bd-like_sf
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF03422 CBM_6, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 1 hit
SUPFAMiSSF49785 SSF49785, 2 hits
SSF49899 SSF49899, 1 hit
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 1 hit

Sequencei

Sequence statusi: Complete.

D5EIK7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFHLKTCLYV PLLCSSTLLA QTVKLDPTIQ RYIGGVSDLD RAKYFTLHSA
60 70 80 90 100
NSTDAELVQF YNDYDVIRSR GFWGPFSDAL QRTGVVGQYP GDVQGAGGVR
110 120 130 140 150
PVSENYIATE HPRNVIRYDL DVNAAADWVV EYYKDYSGNN PIPEFFEVMN
160 170 180 190 200
EPFVHAGDAE FSAQQPDAQL MRVRMAEWFG AIGAKVNQTP ELANLKIIGF
210 220 230 240 250
ADAWPQYEHV SNGTMFSIWN SRQKMFMDVA GADVDAFSTH LYDGVNVNQN
260 270 280 290 300
GGERSGSNAM AILDMIEAYS HIKWGTVKPH VISEYGGIAS GYPAGWNDIE
310 320 330 340 350
AVQSVMSQNK MIFDLMDRED RIEMTIPFVT DKSTWHLTAG NNYEPYGAVV
360 370 380 390 400
MRPGNTGSGQ APDGTWVYTP KITFYELWQG VKGKRVQISS DHPDIQTQAF
410 420 430 440 450
VDGNKLFVAL NNLDDISHTV TLDFASQIAG LQSVRTRALK IYPNSPHNWS
460 470 480 490 500
DTTAATAPAS VTLIADETVM LEYTYQSNIS FGNAIRSQHY YANKYLQDIS
510 520 530 540 550
ANQTQSYLIN GVTTGTSGYA KLKMSIGREH AHSKAPTVTV NGTTVSVPSN
560 570 580 590 600
WRGYDQTARG AVFFGAIEIP VPLNLIQASN TINLTFPDSG GAVSSLILEV
610 620 630 640 650
ATHDTPVNTR APFGGVARAI PGIIEAEDFD NGGEDVAYND STPGNSGASA
660 670 680 690 700
YRSGENVDIE ATTDVGGGVN VGWIGNGEWL EYTVDAATGN YDIELRVASG
710 720 730 740 750
STTPGDVQVS LDGEILGTFD LSSTGGWQTW STLTLNNVAI TGGNDKVLRL
760 770 780 790 800
TAVGANFNIN WIQFNELAPE TVNGDLLPTS LVSAETFTVE VPYSTNVARD
810 820 830 840 850
VVVEFWDTGW RDQDTVTVGP GTGTASLTLT PSGGAPVAGT GYLFKVSLRE
860 870 880 890 900
VGAGWQNPID SFNAAVEITN PPETVDCSLL PTAIVSAATF SVDVPYSVNE
910 920 930 940 950
QRDIVVEFWD SGWLYQDRVT VNAGSGVATL TMAPSGGAPA PGTGYLFKTS
960 970 980 990 1000
LREVGGGWQN PIDSCNSAVE ILPAVFYTST VDVGSTALAG STTESAGVYT
1010 1020 1030 1040 1050
LQGSGADIWG TADAFQYASQ TAPGNISTIV ARVDSVTNTN EWTKAGVMFR
1060 1070 1080 1090 1100
ADGTAGAQHA MVLMRPDNQV VMQVRTAASA STSIIGPWLT GGTTQVKWVR
1110 1120 1130 1140 1150
LIKNGDVYTG AYSTDGTIWT DLATSTISMG ATPLVGLAVT SHNNAALATA
1160 1170 1180 1190 1200
QFSNLSIKAG GAFDFGTASS PILADHTQIT HTTTSGSARW TTTTSLSSTD
1210 1220 1230 1240 1250
RTTVLDDLQR DIVYSSQPNT FAIDLDDGTY EVTVTMGDTY AHDDMVIKAE
1260 1270 1280 1290 1300
GAIAASNLDR AASQWGDSTF TATVSDGTLD LEFSDGGGTD TNWVVNGLVI

IPQ
Length:1,303
Mass (Da):139,505
Last modified:June 15, 2010 - v1
Checksum:i4A15442FE5BE05A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001998 Genomic DNA Translation: ADE54273.1
RefSeqiWP_013042995.1, NC_014008.1

Genome annotation databases

EnsemblBacteriaiADE54273; ADE54273; Caka_1253
KEGGicaa:Caka_1253

Entry informationi

Entry nameiD5EIK7_CORAD
AccessioniPrimary (citable) accession number: D5EIK7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 28, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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