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Entry version 48 (10 Apr 2019)
Sequence version 1 (18 May 2010)
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Protein
Submitted name:

4-alpha-glucanotransferase

Gene

AL1_00590

Organism
Alistipes shahii WAL 8301
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

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BioCyci
ASHA717959:AL1_RS00240-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

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CAZyi
CBM20 Carbohydrate-Binding Module Family 20
GH77 Glycoside Hydrolase Family 77

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
4-alpha-glucanotransferaseImported (EC:2.4.1.25Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AL1_00590Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiAlistipes shahii WAL 8301Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri717959 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesRikenellaceaeAlistipes

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini115 – 225CBM20InterPro annotationAdd BLAST111

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG4105C9C Bacteria
COG1640 LUCA

KEGG Orthology (KO)

More...
KOi
K00705

Database of Orthologous Groups

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OrthoDBi
814704at2

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
2.60.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR003385 Glyco_hydro_77
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00686 CBM_20, 1 hit
PF02446 Glyco_hydro_77, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM01065 CBM_2, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF49452 SSF49452, 2 hits
SSF51445 SSF51445, 1 hit

PROSITE; a protein domain and family database

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PROSITEi
View protein in PROSITE
PS51166 CBM20, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

D4IIN4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTLLISIEYR TRWGEQLVLR LGKRRIALQY ADGGVWTCAV ERYAPAAQPA
60 70 80 90 100
EYRYEVEREG VCIRSEWRPH TLRIPSREGV RTLRIRDRWQ EMPSDTPFYS
110 120 130 140 150
SAFTRGIFGR GKTGNPKKAA GNITLRVILP TLRPDETLAV AGSGRELGDW
160 170 180 190 200
KRIVPMDDSR FPEWELTLHT AHRFEYKFLI ADRKTLTPIL WEEGANRTWG
210 220 230 240 250
ELPGAGEHAL DAAAYPRFPE RRWQGAGTAI PVFSLRTEED FGVGEFYDLK
260 270 280 290 300
RLIDWAAATG QCVIQVLPIN DTTMTGTWED SYPYNANSTF ALHPQFIRLP
310 320 330 340 350
AAGVVEDDEY RTLRNELNAL PEIDYERVNR HKLRLLRRAF ERHGTRTAAR
360 370 380 390 400
RDYKDFIAAN RHWLIPYAAF CTLRDETGTP DFTRWGGFAR YDRKTVDAYC
410 420 430 440 450
RSHNRDIAFH CYVQYHLHTQ LSEVCAYARA HGIVLKGDLP IGISRTSVDA
460 470 480 490 500
WLYPHLFHMD SQAGAPPDAF SAVGQNWGFP TYNWERMARD GYAWWRARMA
510 520 530 540 550
KMAEYFDAFR IDHILGFFRI WEIPTHAVHG LLGYFNPALP YSADELRGMG
560 570 580 590 600
FDTQDGRYTT PAPDEHMLGE LFGDLAGEVR ATCMKEGRLL PAYATQRKVA
610 620 630 640 650
ARFPGDDERQ TRLREGLMAL LDDVLFIEDP RRKGYFHPRI APHSTHAYRR
660 670 680 690 700
LDGERRAAFD RLYTDFFYHR HNRFWQESAL RKLPVLLSAT EMLTCGEDLG
710 720 730 740 750
MIPDSVPETM HELQILSLEI QRMPKTPGEL FADPAHYPYF SVCTTSTHDM
760 770 780 790 800
NPLRAWWEED RELTARFYHE ALGIGGDVPY FCEPWICRRI LDMHLNSPAM
810 820 830 840 850
LTILPLQDWF STDGELRYPD PAKERINVPA VARYYWRYRM HLPLEELLHK
860
ETFNESLHDM IACSGRR
Length:867
Mass (Da):100,581
Last modified:May 18, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iBC32B47B50B2BA51
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
FP929032 Genomic DNA Translation: CBK62792.1

NCBI Reference Sequences

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RefSeqi
WP_015545746.1, NC_021030.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CBK62792; CBK62792; AL1_00590

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ash:AL1_00590

Pathosystems Resource Integration Center (PATRIC)

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PATRICi
fig|717959.3.peg.2110

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP929032 Genomic DNA Translation: CBK62792.1
RefSeqiWP_015545746.1, NC_021030.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein family/group databases

CAZyiCBM20 Carbohydrate-Binding Module Family 20
GH77 Glycoside Hydrolase Family 77

Genome annotation databases

EnsemblBacteriaiCBK62792; CBK62792; AL1_00590
KEGGiash:AL1_00590
PATRICifig|717959.3.peg.2110

Phylogenomic databases

eggNOGiENOG4105C9C Bacteria
COG1640 LUCA
KOiK00705
OrthoDBi814704at2

Enzyme and pathway databases

BioCyciASHA717959:AL1_RS00240-MONOMER

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR003385 Glyco_hydro_77
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
PfamiView protein in Pfam
PF00686 CBM_20, 1 hit
PF02446 Glyco_hydro_77, 1 hit
SMARTiView protein in SMART
SM01065 CBM_2, 1 hit
SUPFAMiSSF49452 SSF49452, 2 hits
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51166 CBM20, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD4IIN4_9BACT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D4IIN4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: April 10, 2019
This is version 48 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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