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Entry version 79 (18 Sep 2019)
Sequence version 1 (18 May 2010)
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Protein
Submitted name:

Conjugal transfer pilus assembly protein TraE

Gene

traE

Organism
Klebsiella pneumoniae
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Conjugal transfer pilus assembly protein TraEImported
Submitted name:
Conjugal transfer proteinImported
Submitted name:
Conjugal transfer protein TraEImported
Submitted name:
F pilus assembly proteinImported
Submitted name:
F pilus assembly protein TraEImported
Submitted name:
IncF plasmid conjugative transfer pilus assembly protein TraEImported
Submitted name:
TraEImported
Submitted name:
Type IV conjugative transfer system protein TraEImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:traEImported
Synonyms:traKImported
ORF Names:BANRA_05637Imported, BVX91_28355Imported, C3483_28005Imported, C3F39_29795Imported, C3F39_30390Imported, C7V41_26735Imported, DD581_04120Imported, DD583_25250Imported, DM059_35705Imported, DM062_06470Imported, EXT45_00880Imported, NCTC1936_05702Imported, NCTC5053_06908Imported, p628KPC_093Imported, pc15-k-056Imported, pKF94-078Imported, SAMEA104567806_05269Imported, SAMEA104567857_05388Imported, SAMEA23986918_08843Imported, SAMEA3531848_02016Imported, SAMEA4873640_05148Imported, SM87_06233Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates if the gene coding for the protein originates from the hydrogenosome, the mitochondrion, the nucleomorph, different plastids or a plasmid. The absence of this section means that the gene is located in one of the main chromosomal element(s).<p><a href='/help/encoded_on' target='_top'>More...</a></p>Encoded oniPlasmid PKPCAPSSImported
Plasmid p1220-CTXMImported
Plasmid p2Imported
Plasmid p628-KPCImported
Plasmid pBK30683Imported
Plasmid pGR-1504Imported
Plasmid pGR-1780Imported
Plasmid pGR-3913Imported
Plasmid pK1HVImported
Plasmid pKDO1Imported
Plasmid pKF3-94Imported
Plasmid pKP048Imported
Plasmid pKP09085Imported
Plasmid pKPN-10f7Imported
Plasmid pKPN-8c6eImported
Plasmid pKPN101-ITImported
Plasmid pKPoxa-48N2Imported
Plasmid pKpQILImported
Plasmid pKpQIL-10Imported
Plasmid pKpQIL-234Imported
Plasmid pKp_EN53_4_IncFIIKImported
Plasmid pRYC11Imported
Plasmid pUSKPC3Imported
Plasmid pVGH151Imported
Plasmid pc15-kImported
Plasmid pkp_en53_4_incfiikImported
Plasmid pkpn-10f7Imported
Plasmid pkpn-8c6eImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiKlebsiella pneumoniaeImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri573 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeKlebsiella
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000290276 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000295363 Componenti: Unassembled WGS sequence
  • UP000289252 Componenti: Unassembled WGS sequence
  • UP000253217 Componenti: Unassembled WGS sequence
  • UP000252552 Componenti: Unassembled WGS sequence
  • UP000295429 Componenti: Unassembled WGS sequence
  • UP000276286 Componenti: Unassembled WGS sequence
  • UP000293472 Componenti: Plasmid pkp_en53_4_incfiik
  • UP000036307 Componenti: Unassembled WGS sequence
  • UP000239813 Componenti: Plasmid pkpn-8c6e
  • UP000295084 Componenti: Unassembled WGS sequence
  • UP000245017 Componenti: Unassembled WGS sequence
  • UP000254387 Componenti: Unassembled WGS sequence
  • UP000238332 Componenti: Plasmid p2
  • UP000092856 Componenti: Unassembled WGS sequence
  • UP000254753 Componenti: Unassembled WGS sequence
  • UP000218240 Componenti: Unassembled WGS sequence
  • UP000262540 Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei12 – 33HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KEGG Orthology (KO)

More...
KOi
K12067

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR007973 Pilus_assembly_TraE

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05309 TraE, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02761 TraE_TIGR, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

D4HQK1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEHGARQNTT RVIAVGFISL GTLLTLSLAT NIIQGINNYR LQTEQKVAVT
60 70 80 90 100
PMLFRAPFAV SQNQADASYI EQLGLSFVAL RLNVTPETVD AQHQQLLRYV
110 120 130 140 150
LPASQNSLKV QLAEDAKRIK DNNVNSTFYM TSMRAWPAEN RVDIRGELKT
160 170 180
WIGDSKPYSE IKSYVIQFSR VDGVSWLARF GEINNEKN
Length:188
Mass (Da):21,192
Last modified:May 18, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD5143CAD8CA731CF
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
FJ876826 Genomic DNA Translation: ADD63447.1
GU595196 Genomic DNA Translation: ADE44036.1
FJ628167 Genomic DNA Translation: ADJ18679.1
HQ202266 Genomic DNA Translation: ADX60445.1
JX283456 Genomic DNA Translation: AFS33626.1
JX424423 Genomic DNA Translation: AFV70343.1
KC757417 Genomic DNA Translation: AGL13113.1
KF719970 Genomic DNA Translation: AHG55643.1
KF874496 Genomic DNA Translation: AHI61469.1
KF874497 Genomic DNA Translation: AHI61576.1
KF874499 Genomic DNA Translation: AHI61788.1
KF954760 Genomic DNA Translation: AHL68134.1
KJ146687 Genomic DNA Translation: AHN60225.1
KJ146689 Genomic DNA Translation: AHN60457.1
KJ721789 Genomic DNA Translation: AIT41822.1
KJ721790 Genomic DNA Translation: AIT42055.1
KP008371 Genomic DNA Translation: AJF79815.1
KP987218 Genomic DNA Translation: ALA09048.1
KY174332 Genomic DNA Translation: ASF89714.1
CP026396 Genomic DNA Translation: AUY22906.1
CP026397 Genomic DNA Translation: AUY23018.1
CP026588 Genomic DNA Translation: AVB75145.1
HF545434 Genomic DNA Translation: CCN80052.1
LK391770 Genomic DNA Translation: CDR98262.1
LFBC01000045 Genomic DNA Translation: KMI20781.1
NSMB01000088 Genomic DNA Translation: PAX10053.1
PYBH01000030 Genomic DNA Translation: PWF56197.1
QORQ01000659 Genomic DNA Translation: RCI98693.1
QOUG01001929 Genomic DNA Translation: RCJ88882.1
QFMH01000013 Genomic DNA Translation: RXY88410.1
QFMF01000038 Genomic DNA Translation: RXZ06896.1
SGOL01000002 Genomic DNA Translation: RZG41409.1
FLXG01000005 Genomic DNA Translation: SBX63467.1
UFBK01000053 Genomic DNA Translation: SSG35514.1
UGLI01000002 Genomic DNA Translation: STU48542.1
UGMN01000006 Genomic DNA Translation: STX88645.1
UWYB01000003 Genomic DNA Translation: VDA28953.1
CAAGWD010000029 Genomic DNA Translation: VGD42606.1
CAAGYG010000039 Genomic DNA Translation: VGG16515.1
CAAHCJ010000040 Genomic DNA Translation: VGL52671.1

NCBI Reference Sequences

More...
RefSeqi
WP_004144423.1, NZ_UWZM01000003.1
YP_003517493.1, NC_013950.1
YP_003560466.1, NC_014016.1
YP_003754105.1, NC_014312.1
YP_004249907.1, NC_015154.1
YP_006959449.1, NC_019165.1
YP_006973677.1, NC_019389.1
YP_007349619.1, NC_020087.1
YP_008110900.1, NC_021502.1
YP_008999042.1, NC_023332.1
YP_009022570.1, NC_023903.1
YP_009022677.1, NC_023904.1
YP_009022889.1, NC_023906.1
YP_009067687.1, NC_025131.1
YP_009070177.1, NC_025166.1
YP_009071927.1, NC_025187.1
YP_009328854.1, NC_032103.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ALR28539; ALR28539; AGG09_02345
KMI20781; KMI20781; SM87_06233
SAV13237; SAV13237; SAMEA2273624_05724
SBX63467; SBX63467; SAMEA3531848_02016

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
10228454
13914714
13981942
15152913
15842837
18261867
18991058
18991164
18991374
20493673
20493961
20494379
30522783
40044907
8877481
8984325
9389584

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
kpb:FH42_26130

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|573.1352.peg.5402

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ876826 Genomic DNA Translation: ADD63447.1
GU595196 Genomic DNA Translation: ADE44036.1
FJ628167 Genomic DNA Translation: ADJ18679.1
HQ202266 Genomic DNA Translation: ADX60445.1
JX283456 Genomic DNA Translation: AFS33626.1
JX424423 Genomic DNA Translation: AFV70343.1
KC757417 Genomic DNA Translation: AGL13113.1
KF719970 Genomic DNA Translation: AHG55643.1
KF874496 Genomic DNA Translation: AHI61469.1
KF874497 Genomic DNA Translation: AHI61576.1
KF874499 Genomic DNA Translation: AHI61788.1
KF954760 Genomic DNA Translation: AHL68134.1
KJ146687 Genomic DNA Translation: AHN60225.1
KJ146689 Genomic DNA Translation: AHN60457.1
KJ721789 Genomic DNA Translation: AIT41822.1
KJ721790 Genomic DNA Translation: AIT42055.1
KP008371 Genomic DNA Translation: AJF79815.1
KP987218 Genomic DNA Translation: ALA09048.1
KY174332 Genomic DNA Translation: ASF89714.1
CP026396 Genomic DNA Translation: AUY22906.1
CP026397 Genomic DNA Translation: AUY23018.1
CP026588 Genomic DNA Translation: AVB75145.1
HF545434 Genomic DNA Translation: CCN80052.1
LK391770 Genomic DNA Translation: CDR98262.1
LFBC01000045 Genomic DNA Translation: KMI20781.1
NSMB01000088 Genomic DNA Translation: PAX10053.1
PYBH01000030 Genomic DNA Translation: PWF56197.1
QORQ01000659 Genomic DNA Translation: RCI98693.1
QOUG01001929 Genomic DNA Translation: RCJ88882.1
QFMH01000013 Genomic DNA Translation: RXY88410.1
QFMF01000038 Genomic DNA Translation: RXZ06896.1
SGOL01000002 Genomic DNA Translation: RZG41409.1
FLXG01000005 Genomic DNA Translation: SBX63467.1
UFBK01000053 Genomic DNA Translation: SSG35514.1
UGLI01000002 Genomic DNA Translation: STU48542.1
UGMN01000006 Genomic DNA Translation: STX88645.1
UWYB01000003 Genomic DNA Translation: VDA28953.1
CAAGWD010000029 Genomic DNA Translation: VGD42606.1
CAAGYG010000039 Genomic DNA Translation: VGG16515.1
CAAHCJ010000040 Genomic DNA Translation: VGL52671.1
RefSeqiWP_004144423.1, NZ_UWZM01000003.1
YP_003517493.1, NC_013950.1
YP_003560466.1, NC_014016.1
YP_003754105.1, NC_014312.1
YP_004249907.1, NC_015154.1
YP_006959449.1, NC_019165.1
YP_006973677.1, NC_019389.1
YP_007349619.1, NC_020087.1
YP_008110900.1, NC_021502.1
YP_008999042.1, NC_023332.1
YP_009022570.1, NC_023903.1
YP_009022677.1, NC_023904.1
YP_009022889.1, NC_023906.1
YP_009067687.1, NC_025131.1
YP_009070177.1, NC_025166.1
YP_009071927.1, NC_025187.1
YP_009328854.1, NC_032103.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiALR28539; ALR28539; AGG09_02345
KMI20781; KMI20781; SM87_06233
SAV13237; SAV13237; SAMEA2273624_05724
SBX63467; SBX63467; SAMEA3531848_02016
GeneIDi10228454
13914714
13981942
15152913
15842837
18261867
18991058
18991164
18991374
20493673
20493961
20494379
30522783
40044907
8877481
8984325
9389584
KEGGikpb:FH42_26130
PATRICifig|573.1352.peg.5402

Phylogenomic databases

KOiK12067

Family and domain databases

InterProiView protein in InterPro
IPR007973 Pilus_assembly_TraE
PfamiView protein in Pfam
PF05309 TraE, 1 hit
TIGRFAMsiTIGR02761 TraE_TIGR, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD4HQK1_KLEPN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D4HQK1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: September 18, 2019
This is version 79 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported
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