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Protein
Submitted name:

Receptor (chemosensory) transporter protein 1

Gene

Rtp1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • olfactory receptor binding Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Enzyme and pathway databases

ReactomeiR-RNO-381753 Olfactory Signaling Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
Receptor (chemosensory) transporter protein 1Imported
Submitted name:
Receptor transporter protein 1 (Predicted)Imported
Gene namesi
Name:Rtp1Imported
Synonyms:Rtp1_predictedImported
ORF Names:rCG_36707Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1560980 Rtp1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei238 – 257HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiD4AEN1

Expressioni

Gene expression databases

BgeeiENSRNOG00000021992 Expressed in 3 organ(s), highest expression level in heart

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029915

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini87 – 197zf-3CxxCInterPro annotationAdd BLAST111

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IE69 Eukaryota
ENOG41119VJ LUCA
GeneTreeiENSGT00530000063222
OMAiQDTRRHR
OrthoDBiEOG091G0DS4
TreeFamiTF333246

Family and domain databases

InterProiView protein in InterPro
IPR026096 R-trans_p
IPR026692 RTP1
IPR027377 Znf-3CxxC
PANTHERiPTHR14402 PTHR14402, 1 hit
PTHR14402:SF19 PTHR14402:SF19, 1 hit
PfamiView protein in Pfam
PF13695 zf-3CxxC, 1 hit
SMARTiView protein in SMART
SM01328 zf-3CxxC, 1 hit

Sequencei

Sequence statusi: Complete.

D4AEN1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRIFRPWRLR CPALHLPSFP TFSIKWSLPS LPTDEDMCKS VTTGEWKKVF
60 70 80 90 100
YEKMEEVKPA DSWDFIIDPN LKHNVLAPGW KQYLELHASG RFHCSWCWHT
110 120 130 140 150
WQSPHVVILF HMYLDKAQRA GSVRMRVFKQ LCYECGTARL DESSMLEENI
160 170 180 190 200
ESLVDNLITS LREQCYGERG GHYRIHVASR QDNRRHRGEF CEACQEGIVH
210 220 230 240 250
WKPSEKLLEE EATTYTFSRA PSPTKPQAET GSGCNFCSIP WCLFWATVLL
260
LIIYLQFSFR SSV
Length:263
Mass (Da):30,773
Last modified:April 20, 2010 - v1
Checksum:iAA1D7A0BEDD60710
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034599 Genomic DNA No translation available.
CH473999 Genomic DNA Translation: EDL78088.1
RefSeqiNP_001099340.1, NM_001105870.1
UniGeneiRn.218465

Genome annotation databases

EnsembliENSRNOT00000032383; ENSRNOP00000029915; ENSRNOG00000021992
GeneIDi288006
KEGGirno:288006
UCSCiRGD:1560980 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034599 Genomic DNA No translation available.
CH473999 Genomic DNA Translation: EDL78088.1
RefSeqiNP_001099340.1, NM_001105870.1
UniGeneiRn.218465

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029915

Proteomic databases

PRIDEiD4AEN1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000032383; ENSRNOP00000029915; ENSRNOG00000021992
GeneIDi288006
KEGGirno:288006
UCSCiRGD:1560980 rat

Organism-specific databases

CTDi132112
RGDi1560980 Rtp1

Phylogenomic databases

eggNOGiENOG410IE69 Eukaryota
ENOG41119VJ LUCA
GeneTreeiENSGT00530000063222
OMAiQDTRRHR
OrthoDBiEOG091G0DS4
TreeFamiTF333246

Enzyme and pathway databases

ReactomeiR-RNO-381753 Olfactory Signaling Pathway

Gene expression databases

BgeeiENSRNOG00000021992 Expressed in 3 organ(s), highest expression level in heart

Family and domain databases

InterProiView protein in InterPro
IPR026096 R-trans_p
IPR026692 RTP1
IPR027377 Znf-3CxxC
PANTHERiPTHR14402 PTHR14402, 1 hit
PTHR14402:SF19 PTHR14402:SF19, 1 hit
PfamiView protein in Pfam
PF13695 zf-3CxxC, 1 hit
SMARTiView protein in SMART
SM01328 zf-3CxxC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4AEN1_RAT
AccessioniPrimary (citable) accession number: D4AEN1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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