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Protein
Submitted name:

Helt bHLH transcription factor

Gene

Helt

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Helt bHLH transcription factorImported
Gene namesi
Name:HeltImported
Synonyms:Helt-ps1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 16

Organism-specific databases

RGDi1564073 Helt

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiD4ADJ5
PRIDEiD4ADJ5

PTM databases

iPTMnetiD4ADJ5
PhosphoSitePlusiD4ADJ5

Expressioni

Gene expression databases

BgeeiENSRNOG00000010785 Expressed in 1 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014360

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 65BHLHInterPro annotationAdd BLAST56
Domaini86 – 121OrangeInterPro annotationAdd BLAST36

Phylogenomic databases

eggNOGiKOG4304 Eukaryota
ENOG4111F0X LUCA
GeneTreeiENSGT00700000104130
InParanoidiD4ADJ5
OMAiHAHPNAL
OrthoDBiEOG091G115T
PhylomeDBiD4ADJ5
TreeFamiTF323617

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit

Sequencei

Sequence statusi: Complete.

D4ADJ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDRLKERKR TPVSHKVIEK RRRDRINRCL NELGKTVPMA LAKQSSGKLE
60 70 80 90 100
KAEILEMTVQ YLRALHSADF PRGREKELLA EFANYFHYGY HECMKNLVHY
110 120 130 140 150
LTTVERMETK DTKYARILAF LQSKARLGAE PAFPPLSLPE PDFSYQLHPA
160 170 180 190 200
GPEFPGHSPG EATVFPQGAT PGSFPWPPGA ARSPALPYLS SATVPLPTPA
210 220 230 240
QPHSPFLAPM QGLDRHYLNL IGHGHPNTLN LHTPQHPPVL
Length:240
Mass (Da):26,934
Last modified:April 20, 2010 - v1
Checksum:iBEA36A0E33DE9BAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072511 Genomic DNA No translation available.
RefSeqiXP_003751648.1, XM_003751600.3
XP_003752951.1, XM_003752903.3

Genome annotation databases

EnsembliENSRNOT00000014360; ENSRNOP00000014360; ENSRNOG00000010785
GeneIDi498633
KEGGirno:498633

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072511 Genomic DNA No translation available.
RefSeqiXP_003751648.1, XM_003751600.3
XP_003752951.1, XM_003752903.3

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014360

PTM databases

iPTMnetiD4ADJ5
PhosphoSitePlusiD4ADJ5

Proteomic databases

PaxDbiD4ADJ5
PRIDEiD4ADJ5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000014360; ENSRNOP00000014360; ENSRNOG00000010785
GeneIDi498633
KEGGirno:498633

Organism-specific databases

CTDi391723
RGDi1564073 Helt

Phylogenomic databases

eggNOGiKOG4304 Eukaryota
ENOG4111F0X LUCA
GeneTreeiENSGT00700000104130
InParanoidiD4ADJ5
OMAiHAHPNAL
OrthoDBiEOG091G115T
PhylomeDBiD4ADJ5
TreeFamiTF323617

Gene expression databases

BgeeiENSRNOG00000010785 Expressed in 1 organ(s), highest expression level in brain

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR003650 Orange_dom
PfamiView protein in Pfam
PF07527 Hairy_orange, 1 hit
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS51054 ORANGE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4ADJ5_RAT
AccessioniPrimary (citable) accession number: D4ADJ5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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