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Protein
Submitted name:

Neural retina leucine zipper

Gene

Nrl

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Neural retina leucine zipperImported
Submitted name:
Neural retina leucine zipper gene (Predicted)Imported
Gene namesi
Name:NrlImported
Synonyms:Nrl_predictedImported
ORF Names:rCG_23347Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi1305197 Nrl

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD4ACF4

Expressioni

Gene expression databases

BgeeiENSRNOG00000018528 Expressed in 1 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024991

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini160 – 223BZIPInterPro annotationAdd BLAST64

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili185 – 219Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the bZIP family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4196 Eukaryota
ENOG41102C7 LUCA
GeneTreeiENSGT00550000074549
KOiK09038
OMAiEGPHGYY
OrthoDBiEOG091G0H46
TreeFamiTF325689

Family and domain databases

InterProiView protein in InterPro
IPR004827 bZIP
IPR004826 bZIP_Maf
IPR013592 Maf_TF_N
IPR028575 Nrl
IPR008917 TF_DNA-bd_sf
IPR024874 Transciption_factor_Maf_fam
PANTHERiPTHR10129 PTHR10129, 1 hit
PTHR10129:SF24 PTHR10129:SF24, 1 hit
PfamiView protein in Pfam
PF03131 bZIP_Maf, 1 hit
PF08383 Maf_N, 1 hit
SMARTiView protein in SMART
SM00338 BRLZ, 1 hit
SUPFAMiSSF47454 SSF47454, 1 hit
PROSITEiView protein in PROSITE
PS50217 BZIP, 1 hit

Sequencei

Sequence statusi: Complete.

D4ACF4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALPPSPLAM EYVNDFDLMK FEIKREPSEG RSGVPTASLG STPYSSVPPS
60 70 80 90 100
PTFSEPGMVG NSEAPRPAGL EELYWLATLQ QQLGADEVLG LSPDEAVELL
110 120 130 140 150
QSQGPVSVEG PHGYYSGSPG ETGAPNVQLP ERFSDAALVS MSVRELNRQL
160 170 180 190 200
RGCGRDEALR LKQRRRTLKN RGYAQACRSK RLQQRRGLEA ERARLAAQLD
210 220 230
ALRAEVARLA RERDLYKARC DRLTSGGPGS DDHTHLFL
Length:238
Mass (Da):26,102
Last modified:April 20, 2010 - v1
Checksum:iBB768E790AC28821
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072457 Genomic DNA No translation available.
CH474049 Genomic DNA Translation: EDM14235.1
RefSeqiNP_001099506.1, NM_001106036.2
XP_006251997.1, XM_006251935.3
XP_006251999.1, XM_006251937.3
XP_008768894.1, XM_008770672.2
XP_017455109.1, XM_017599620.1
XP_017455110.1, XM_017599621.1
UniGeneiRn.231129

Genome annotation databases

EnsembliENSRNOT00000024991; ENSRNOP00000024991; ENSRNOG00000018528
GeneIDi290221
KEGGirno:290221
UCSCiRGD:1305197 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072457 Genomic DNA No translation available.
CH474049 Genomic DNA Translation: EDM14235.1
RefSeqiNP_001099506.1, NM_001106036.2
XP_006251997.1, XM_006251935.3
XP_006251999.1, XM_006251937.3
XP_008768894.1, XM_008770672.2
XP_017455109.1, XM_017599620.1
XP_017455110.1, XM_017599621.1
UniGeneiRn.231129

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024991

Proteomic databases

PRIDEiD4ACF4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000024991; ENSRNOP00000024991; ENSRNOG00000018528
GeneIDi290221
KEGGirno:290221
UCSCiRGD:1305197 rat

Organism-specific databases

CTDi4901
RGDi1305197 Nrl

Phylogenomic databases

eggNOGiKOG4196 Eukaryota
ENOG41102C7 LUCA
GeneTreeiENSGT00550000074549
KOiK09038
OMAiEGPHGYY
OrthoDBiEOG091G0H46
TreeFamiTF325689

Gene expression databases

BgeeiENSRNOG00000018528 Expressed in 1 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR004827 bZIP
IPR004826 bZIP_Maf
IPR013592 Maf_TF_N
IPR028575 Nrl
IPR008917 TF_DNA-bd_sf
IPR024874 Transciption_factor_Maf_fam
PANTHERiPTHR10129 PTHR10129, 1 hit
PTHR10129:SF24 PTHR10129:SF24, 1 hit
PfamiView protein in Pfam
PF03131 bZIP_Maf, 1 hit
PF08383 Maf_N, 1 hit
SMARTiView protein in SMART
SM00338 BRLZ, 1 hit
SUPFAMiSSF47454 SSF47454, 1 hit
PROSITEiView protein in PROSITE
PS50217 BZIP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4ACF4_RAT
AccessioniPrimary (citable) accession number: D4ACF4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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