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Protein
Submitted name:

Transport and golgi organization 6 homolog

Gene

Tango6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Transport and golgi organization 6 homologImported
Gene namesi
Name:Tango6Imported
Synonyms:RGD1559841Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 19

Organism-specific databases

RGDi1559841 Tango6

PTM / Processingi

Proteomic databases

PaxDbiD4AAU1

Expressioni

Gene expression databases

BgeeiENSRNOG00000022524 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue
ExpressionAtlasiD4AAU1 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini829 – 940RTP1_C1InterPro annotationAdd BLAST112
Domaini1031 – 1064RTP1_C2InterPro annotationAdd BLAST34

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili860 – 880Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4653 Eukaryota
ENOG410XS2I LUCA
GeneTreeiENSGT00390000010938
InParanoidiD4AAU1
OMAiGVCPYLM
OrthoDBiEOG091G02MW
TreeFamiTF330876

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR019451 Rtp1_C1
IPR019414 Rtp1_C2
PfamiView protein in Pfam
PF10363 RTP1_C1, 1 hit
PF10304 RTP1_C2, 1 hit
SUPFAMiSSF48371 SSF48371, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

D4AAU1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAASVQAAAA PSGVLGTCGL EQILEALKLL LSPGGSGSTS LQNTKHDVLL
60 70 80 90 100
ETLKSNLSAL EAKFLKDAQW KKLKTLRDEI ADKAEWPQSS EDITWSFTSQ
110 120 130 140 150
TLLLLLCLKE IMTRLVAEFN PGKPNPRTPE AAPALSPDTL SVSQQKTFQS
160 170 180 190 200
VLQFVVTLGV CPYLMPGVGV PLRDRTEFGA VVQGIVRLEA APHATRRLYI
210 220 230 240 250
CCRVLLDLAQ HASLGSLIFC RHFGDIAAGL CQLGFCPTKR KPPVPVEEVL
260 270 280 290 300
TEEERTLSRQ ALRDILDQVY QPLAVRELLI LQGGSPQSCT DVKTKLRCPA
310 320 330 340 350
PAWLRRLCGQ LLSERLMRPN GVQAVVRGIL EGAGAGAAGG SDAEATAADW
360 370 380 390 400
KKCDLIAKIL ASCPQQSLSP ESYYKDICPQ ILDLFHLQDK LTARQFQRVA
410 420 430 440 450
TTTFTTMLRE RPELAPKYLL QPMLAPLHRC STTAEIPESD MVPGTVLVTE
460 470 480 490 500
EELSRCVEDV FKVYVVANEP LPVLLDSLLP LLGVFFSLYC FTQQSASHIR
510 520 530 540 550
SLCQEILLWA LVKLERKRAI ASLRGFSGLD KAVPALHPQC QFRAATHGGI
560 570 580 590 600
VITVKEALSD DEDEALYQKV SSEQSQMEHL GDLLLHCQPC GLAGDFFIFC
610 620 630 640 650
LKELSHLLEE NEAEFTPKPP CSTSLLELEQ HQTLLIEDQE RKLLVLQLLA
660 670 680 690 700
VLCEKMSEQI FTHITQVVDF VAATLQRACA GLAHEAESTV GSQTLSMAMG
710 720 730 740 750
LVAAMLGGAV QLKSSDFVVL KQLLPLLEKV SNTYPDPVIQ ELAVDLRITI
760 770 780 790 800
STHGAFSTEA VSTAAQSTLN KKDPEQKIKE QRQTSYDAST EGTQNRPEQE
810 820 830 840 850
QNPLRTGQGS SEPCTATSQP PGNITTEQFR EVLLSACDPQ VPTRAAALRT
860 870 880 890 900
LSRWVEQREG RALEEQKKLL QIFLENLEHE DSFVYLSAIQ GVALLSDVYP
910 920 930 940 950
EEILVDLLAR YDSSKDKHTP ETRMKVGEVL MRIVRALGDM VSKYREPLIH
960 970 980 990 1000
TFLRGVKDPD GAHRASSLSN LGELCQRLDF LLGPVVHEVT ICLTAVAKTD
1010 1020 1030 1040 1050
TDVQVRRAAV HVVVLLLRGL SQKATEVLSD VLKDLYHLLK HVVRLEPDDV
1060 1070 1080
AKIQAQLALE ELDEIMRNFL FPPQKLEKKI MVLP
Length:1,084
Mass (Da):119,613
Last modified:July 22, 2015 - v3
Checksum:iBA1C06188A9A10B8
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D4A9F1D4A9F1_RAT
Transport and golgi organization 6 ...
Tango6 RGD1559841
919Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07043756 Genomic DNA No translation available.
AABR07043757 Genomic DNA No translation available.
AABR07043758 Genomic DNA No translation available.
AABR07043759 Genomic DNA No translation available.
AABR07043760 Genomic DNA No translation available.
AABR07043761 Genomic DNA No translation available.
AABR07043762 Genomic DNA No translation available.
AABR07043763 Genomic DNA No translation available.
AABR07043764 Genomic DNA No translation available.
AABR07043765 Genomic DNA No translation available.
RefSeqiXP_226428.6, XM_226428.9

Genome annotation databases

EnsembliENSRNOT00000030768; ENSRNOP00000033600; ENSRNOG00000022524
GeneIDi307816

Similar proteinsi

Entry informationi

Entry nameiD4AAU1_RAT
AccessioniPrimary (citable) accession number: D4AAU1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: September 12, 2018
This is version 53 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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