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Protein
Submitted name:

CDGSH iron sulfur domain 2

Gene

Cisd2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CDGSH iron sulfur domain 2Imported
Submitted name:
Similar to RIKEN cDNA 1500009M05 (Predicted)Imported
Gene namesi
Name:Cisd2Imported
Synonyms:RGD1566242_predictedImported
ORF Names:rCG_28708Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1566242 Cisd2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei38 – 56HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiD4AAE9

Expressioni

Gene expression databases

BgeeiENSRNOG00000048258 Expressed in 10 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000066613

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini81 – 120ZnF_CDGSHInterPro annotationAdd BLAST40

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3461 Eukaryota
ENOG41122II LUCA
GeneTreeiENSGT00390000001233
OMAiTGYLAFC
OrthoDBiEOG091G0XB4
TreeFamiTF324661

Family and domain databases

InterProiView protein in InterPro
IPR018967 FeS-contain_CDGSH-typ
IPR019610 FeS-contain_mitoNEET_N
PfamiView protein in Pfam
PF10660 MitoNEET_N, 1 hit
PF09360 zf-CDGSH, 1 hit
SMARTiView protein in SMART
SM00704 ZnF_CDGSH, 1 hit

Sequencei

Sequence statusi: Complete.

D4AAE9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVLDSVARIV KVQLPAYLKQ LPLPDSITGF ARLTVAEWLR LLPFLGVLAL
60 70 80 90 100
LGYLAVRPFF PKKKQQKDSL INLKIQKENP KVVNEINIED LNLTKAAYCR
110 120 130
CWRSKTFPAC DGSHNKHNEL TGDNVGPLIL RKKEV
Length:135
Mass (Da):15,293
Last modified:April 20, 2010 - v1
Checksum:i421FF1D2DB018DC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120718 Genomic DNA No translation available.
CH473952 Genomic DNA Translation: EDL82257.1
RefSeqiNP_001178537.1, NM_001191608.1
UniGeneiRn.24858

Genome annotation databases

EnsembliENSRNOT00000074632; ENSRNOP00000066613; ENSRNOG00000048258
GeneIDi295457
KEGGirno:295457

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120718 Genomic DNA No translation available.
CH473952 Genomic DNA Translation: EDL82257.1
RefSeqiNP_001178537.1, NM_001191608.1
UniGeneiRn.24858

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000066613

Proteomic databases

PRIDEiD4AAE9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000074632; ENSRNOP00000066613; ENSRNOG00000048258
GeneIDi295457
KEGGirno:295457

Organism-specific databases

CTDi493856
RGDi1566242 Cisd2

Phylogenomic databases

eggNOGiKOG3461 Eukaryota
ENOG41122II LUCA
GeneTreeiENSGT00390000001233
OMAiTGYLAFC
OrthoDBiEOG091G0XB4
TreeFamiTF324661

Gene expression databases

BgeeiENSRNOG00000048258 Expressed in 10 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR018967 FeS-contain_CDGSH-typ
IPR019610 FeS-contain_mitoNEET_N
PfamiView protein in Pfam
PF10660 MitoNEET_N, 1 hit
PF09360 zf-CDGSH, 1 hit
SMARTiView protein in SMART
SM00704 ZnF_CDGSH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4AAE9_RAT
AccessioniPrimary (citable) accession number: D4AAE9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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