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Protein

Neurogenic differentiation factor

Gene

Neurod4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinUniRule annotation, DNA-bindingUniRule annotation
Biological processDifferentiationUniRule annotation, NeurogenesisUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Neurogenic differentiation factorUniRule annotation
Gene namesi
Name:Neurod4Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1310434 Neurod4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

PTM / Processingi

Proteomic databases

PaxDbiD4A7M5

Expressioni

Gene expression databases

BgeeiENSRNOG00000008449

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011167

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini87 – 139BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiENOG410KD2S Eukaryota
ENOG410Z6FG LUCA
GeneTreeiENSGT00680000099860
InParanoidiD4A7M5
OMAiYGHMETH
OrthoDBiEOG091G15AI
PhylomeDBiD4A7M5
TreeFamiTF315153

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032651 Neurod4
IPR022575 Neurogenic_DUF
IPR016637 TF_bHLH_NeuroD
PANTHERiPTHR19290:SF86 PTHR19290:SF86, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF12533 Neuro_bHLH, 1 hit
PIRSFiPIRSF015618 bHLH_NeuroD, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D4A7M5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKMYMKSKD MVELVNTQSW MDKGLSSQNE MEEQERRPGS YGMLGTLMEE
60 70 80 90 100
HDSIEEEEEE EEDGDKPKRR GPKKKKMTKA RLERFRARRV KANARERTRM
110 120 130 140 150
HGLNDALDNL RRVMPCYSKT QKLSKIETLR LARNYIWALS EVLETGQTLE
160 170 180 190 200
GKGFVEMLCK GLSQPTSNLV AGCLQLGPQS ALLEKREEKS PICDSTVSVH
210 220 230 240 250
SFNYQSPGLP SPPYGHMETH PLHLKPQPFK SLGDSFGSHP PDCSTPPYEG
260 270 280 290 300
PLTPPLSISG NFSLKQEGSP DLEKSYNFMP HYTSASVSSG HVHSTPFQTG
310 320 330
TPRYDVPVDL TYDSYPHHGI GTQINTIFSD
Length:330
Mass (Da):37,167
Last modified:April 20, 2010 - v1
Checksum:i89D4E9FE2136A953
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07055767 Genomic DNA No translation available.
AABR07073276 Genomic DNA No translation available.
RefSeqiXP_006240880.1, XM_006240818.3
XP_006240881.1, XM_006240819.3
XP_006240882.1, XM_006240820.3
XP_006240884.1, XM_006240822.3
XP_006240885.1, XM_006240823.3
XP_017450179.1, XM_017594690.1
UniGeneiRn.120002

Genome annotation databases

EnsembliENSRNOT00000011167; ENSRNOP00000011167; ENSRNOG00000008449
GeneIDi288821
UCSCiRGD:1310434 rat

Similar proteinsi

Entry informationi

Entry nameiD4A7M5_RAT
AccessioniPrimary (citable) accession number: D4A7M5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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