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Protein
Submitted name:

Zinc finger and BTB domain-containing 7B

Gene

Zbtb7b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain-containing 7BImported
Gene namesi
Name:Zbtb7bImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1305963 Zbtb7b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD4A579
PeptideAtlasiD4A579
PRIDEiD4A579

Expressioni

Gene expression databases

BgeeiENSRNOG00000020640 Expressed in 9 organ(s), highest expression level in liver

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028010

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 115BTBInterPro annotationAdd BLAST82
Domaini350 – 377C2H2-typeInterPro annotationAdd BLAST28
Domaini378 – 405C2H2-typeInterPro annotationAdd BLAST28
Domaini406 – 433C2H2-typeInterPro annotationAdd BLAST28
Domaini434 – 467C2H2-typeInterPro annotationAdd BLAST34

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000150939
OMAiSRGARYP
OrthoDBiEOG091G08VI
PhylomeDBiD4A579
TreeFamiTF331824

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

D4A579-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSPEDDLIG IPFPDHSSEL LSCLNEQRQL GHLCDLTIRT QGLEYRTHRA
60 70 80 90 100
VLAACSHYFK KLFTEGGGGT VMGTGGGGTA AGGAGAGVCE LDFVGPEALG
110 120 130 140 150
ALLEFAYTAT LTTSSANMPA VLQAARLLEI PCVIAACMEI LQGSGLEAPS
160 170 180 190 200
PDEDDCERAR QYLEAFATAT TTASTSGMPN GEDSPPQVPL LPPPPPPPRP
210 220 230 240 250
VARRSRKPRK AFLQTKGARA NHLVPEAPTV LTHPLAYEEE EMVGRVGNSG
260 270 280 290 300
GSGLGDNYSP PAGATSPAEG PLNYEVFEGE EEEEELVYPP AYGLAQSNEP
310 320 330 340 350
SLSPEELGSD EDPIDPDLMA YLSSLHQDAL APGLDGQDKL VRKRRSQMPQ
360 370 380 390 400
ECPVCHKIIH GAGKLPRHMR THTGEKPFAC EVCGVRFTRN DKLKIHMRKH
410 420 430 440 450
TGERPYSCPH CPARFLHSYD LKNHMHLHTG DRPYECHLCH KAFAKEDHLQ
460 470 480 490 500
RHLKGQNCLE VRTRRRRKDD APPHYPPPST TTSSPAGLDL SNGHLDTFRL
510 520 530 540
SLARFWEQSA TTGPPVTTQG PPEEEEEEGT PTTPQAESAM ESS
Length:543
Mass (Da):58,855
Last modified:July 22, 2015 - v3
Checksum:iF3B4B24C4DF4C3D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098750 Genomic DNA No translation available.
RefSeqiXP_006232676.1, XM_006232614.3
XP_008759358.1, XM_008761136.2
XP_008759359.1, XM_008761137.2
XP_017446253.1, XM_017590764.1
UniGeneiRn.73830

Genome annotation databases

EnsembliENSRNOT00000028010; ENSRNOP00000028010; ENSRNOG00000020640
GeneIDi295248
UCSCiRGD:1305963 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098750 Genomic DNA No translation available.
RefSeqiXP_006232676.1, XM_006232614.3
XP_008759358.1, XM_008761136.2
XP_008759359.1, XM_008761137.2
XP_017446253.1, XM_017590764.1
UniGeneiRn.73830

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028010

Proteomic databases

PaxDbiD4A579
PeptideAtlasiD4A579
PRIDEiD4A579

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000028010; ENSRNOP00000028010; ENSRNOG00000020640
GeneIDi295248
UCSCiRGD:1305963 rat

Organism-specific databases

CTDi51043
RGDi1305963 Zbtb7b

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000150939
OMAiSRGARYP
OrthoDBiEOG091G08VI
PhylomeDBiD4A579
TreeFamiTF331824

Gene expression databases

BgeeiENSRNOG00000020640 Expressed in 9 organ(s), highest expression level in liver

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A579_RAT
AccessioniPrimary (citable) accession number: D4A579
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: November 7, 2018
This is version 76 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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